Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00605 ATGCAAACCCACACCGCCAATTTAGCCTTTTTGGAATCCATTAGCCGTCACTTGCTCGGGGAATCCGATGCTGCTCCGGCTGACACATCCAGTAAAAACGCTTTTTACTCTTGGAGCTCCGGTTTCAACAGATTGGATCACTGGGGAGAACTGCATCTCACACAGCATGACCCCGAAGACAGGCTGCTCTACGGTGTATCACGGGAAACACTCCAACTCGGATGGGCCCCAACCGTGAACTTCAAGTCACCGGAGATGGTCTGCTCGGCTTTGCCGTCCACCATTACGGTGAAACCGGAGCCGGATGTAGCACAGGCGGCGTCTGCACCGCAGGAGAAGGCAAGGCATTACCGAGGTGTGCGTCGACGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGGGACCCGGCTAAGAATGGGGCTCGGGTATGGCTGGGGACATTTGAGACGGCGGAGGACGCGGCTCTGGCGTACGACCGAGCCGCCTACAGGATGCGGGGCTCTCGGGCTCTTGTTAATTTTCCGCTGAGGGTGAACTCCGGTGAACCGGATCCAGTGAGAGTGAGGGCGAAGCGGTCTTCGTCGGAGGCAATGTCGTCGAATTCAGAAACTGGGAAGCGTGAAGAGAAGGTGGCGAGAAGGGAAGTCGCGTCTTGTACAAATGGACCGCACCTATTGGTCAGCTAA 684 0.576 MQTHTANLAFLESISRHLLGESDAAPADTSSKNAFYSWSSGFNRLDHWGELHLTQHDPEDRLLYGVSRETLQLGWAPTVNFKSPEMVCSALPSTITVKPEPDVAQAASAPQEKARHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALVNFPLRVNSGEPDPVRVRAKRSSSEAMSSNSETGKREEKVARREVASCTNGPHLLVS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00605 227 ProSiteProfiles AP2/ERF domain profile. 116 174 IPR001471 GO:0003700|GO:0006355
Accr9g00605 227 SMART rav1_2 116 180 IPR001471 GO:0003700|GO:0006355
Accr9g00605 227 CDD AP2 116 174 IPR001471 GO:0003700|GO:0006355
Accr9g00605 227 Gene3D AP2/ERF domain 115 177 IPR036955 GO:0003700|GO:0006355
Accr9g00605 227 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Accr9g00605 227 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Accr9g00605 227 SUPERFAMILY DNA-binding domain 116 176 IPR016177 GO:0003677
Accr9g00605 227 PANTHER DNA-BINDING DOMAIN 92 201 IPR044808 GO:0003700|GO:0009873
Accr9g00605 227 FunFam Ethylene-responsive transcription factor 2 115 175 - -
Accr9g00605 227 MobiDBLite consensus disorder prediction 181 227 - -
Accr9g00605 227 Pfam AP2 domain 116 166 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00605 Accr-Chr9 6995044 6995727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00605 6 226 AP2-EREBP Transcription Factor Family AT4G17500 45.977 1.02e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr9g00605 AP2 1.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00605 K09286 - gmx:100819649 224.557