Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00604 ATGGAGGTCTTTCTCATCTTCATCATCATCCTCTTAGCTCCACTTGATAGGGCTCTTGGAAACGTGACTCTGGGCTCAACACTCTCCACCAATGATCAAACTAACCCTTCATGGCTCTCACCTTCAGGCGAATTCGCTTTTGGATTTCGCCAAATCAACAACACAAACCTGTTTTTGCTTGCCATCTGGTTCAACAACATACCTGACAGAACCATTGTCTGGTATGCAAACATGCCAAATCCAGAAGTACCATCAGGGTCTCGAGTTCAGCTCACACCAACAGGTCTCAGTCTCACTAATCCTCAAGGTCTAACCATATGGACTGCTACATCACAAGAAAAAGTGTCCTCTGGATCTATGTTGAACACTGGAAATTTTGTTTTGGCATCCTCAAATTCTTCCTACTTGTGGCAAAGTTTCGACAATCCCACTGATACTCTGTTGCCAAACCAGACTCTGCCCCTCAACGGTAAGTTGTCTTCTCGCTTGTCACAAACGAATTACACAAAGGGAAAGTTTGAGCTTTATTTCGATAATGGAAATCTCTTGTTAAGTCAGATAGGATGGCCAACTGAATCTCGTTACACTAATTACTTTAGTGTCAACAAGAGTTCATCAGCAACCAATGAAAATGACTCTGCTTTACAGCTAGTCTTTGATCCCTCAAATCTTTATGTAGAGACAAGAAGTGGAGATCATAAACCCCTTGGATCTCACTCAACTCTTGATGCTAACAGATTTTATTACAGGGCTACACTTGATTATTACGGACTTTTAACATTATATTCTTTCCCAAAGGGATCTGACAGCAACCAAGTTTGGTCAATTGTGGTGTATGTTCCAAATGACATTTGCGATGCCATATTCAGTGATTTGGGTAGTGGTTCTTGTGGGTATAATAGCTATTGTTTAATGGAAAATCAGAGACCAACATGCAAATGCTTAGATGGGTACTCTCTAGTTGATCCAAGCAACTTGTTTGGAGGATGCCAACCTGATGCCTCACTTGGTTGTGGGGCTGATGATGTAGAATCAAAAACCAATCCGAAAGAGGTGTATGAGTTTAAGATTATGCAAAATGTAGACTGGCCATTAGGAGATTATGAAAGATTGGAAATTTATACCCAAGATGAATGCCAAACATCTTGCTGGTATGATTGTAATTGTGCTGTTGCCATTTTTGACAATGATCGTACTTGTTGGAAGAAAAGACTACCACTTTCTAATGGAAGAGGAACTGCAGGTAGAGGTCAAACAGCACTCATCAAAATTAGAATTTTGCCAACAAGGAACAATCTTCACCATGTTGTGAAAAAACAACCAGCTCTTTTCGGTTCTCTTGTTGGTTCCCTTGTCATCAACACTTTGCTTGTAGCCATTGTAGTTATGATTATTGTCTTTAGGCCAAAAAGGACTGTCCAAGTTTCAAGTGCTCTGGATGTAAATTTGCACTCTTTCACTTATGAAGCATTGAAAGAGGCAACACTTGGATTCAGTGAAGAGTTAGGAAGGGGTTCATTTGGTACTGTGTACAAAGGCAACCTTAAATCAGGAGCTAATAATGATAACGTTGTTGCAGTGAAGAGGTTGGATAGATTGGCTCAAGAACGAGAGAAGGAGTTTAGGACAGAGTTGAGTGCCATTGGAAAAACATGCCACAAAAATTTGGTGAGATTAATTGGTTTTTGTGATGAGGGAGTTCATAGACTTCTAGTGTACGAGTTCATGAGCAATGGAACTCTTGCAGACATCCTCTTTGGAGAACTCAAACCCATTTGGAATCTAAGGGTTAACTTTGCTTTAGGAATTGCAAGAGGATTGCTTTATTTACATGAAGAGTGTGACGCTCCCATCATTCATTGTGATATAAAGCCTCAGAATATACTGATAAATGAACATTTCATACCAAAAATCTCAGACTTTGGGTTGGCCAAGTTGTTATATTCCAATCAAAGCCGAACTAATACAATGATAAGAGGAACAAGAGGATATGTGGCACCAGAATGGTTCAAGGCTGTTCCAGTGACTGCTAAAGTTGATGTTTATAGCTACGGGGTGATGTTGTTAGAGATAATTTGCTGCAGAAGAAATGTGATGATGGATATGGAAGAAGGGGAGGAAGAAAAGGCAGTGCTAACAGATTGGGCCTATGATTGTTATGCAGAAAGAAGAATAGATATTTTGGTAGAGAAAGATAAGGAAGCCATGGCTGATATAGGGAGGTTGAAGAAGTGGGTGATGATAGCGATTTGGTGTATTCAAGAGAAGCAAGAAGCAAGGCCAAGCATGAAGATCGTGATGCAAATGTTGGAAGGACTTGTTGAAGTTCCAAATCCTCCATTGCCTTCTTCCTTCTCCTCAATTATGATTTGA 2373 0.402 MEVFLIFIIILLAPLDRALGNVTLGSTLSTNDQTNPSWLSPSGEFAFGFRQINNTNLFLLAIWFNNIPDRTIVWYANMPNPEVPSGSRVQLTPTGLSLTNPQGLTIWTATSQEKVSSGSMLNTGNFVLASSNSSYLWQSFDNPTDTLLPNQTLPLNGKLSSRLSQTNYTKGKFELYFDNGNLLLSQIGWPTESRYTNYFSVNKSSSATNENDSALQLVFDPSNLYVETRSGDHKPLGSHSTLDANRFYYRATLDYYGLLTLYSFPKGSDSNQVWSIVVYVPNDICDAIFSDLGSGSCGYNSYCLMENQRPTCKCLDGYSLVDPSNLFGGCQPDASLGCGADDVESKTNPKEVYEFKIMQNVDWPLGDYERLEIYTQDECQTSCWYDCNCAVAIFDNDRTCWKKRLPLSNGRGTAGRGQTALIKIRILPTRNNLHHVVKKQPALFGSLVGSLVINTLLVAIVVMIIVFRPKRTVQVSSALDVNLHSFTYEALKEATLGFSEELGRGSFGTVYKGNLKSGANNDNVVAVKRLDRLAQEREKEFRTELSAIGKTCHKNLVRLIGFCDEGVHRLLVYEFMSNGTLADILFGELKPIWNLRVNFALGIARGLLYLHEECDAPIIHCDIKPQNILINEHFIPKISDFGLAKLLYSNQSRTNTMIRGTRGYVAPEWFKAVPVTAKVDVYSYGVMLLEIICCRRNVMMDMEEGEEEKAVLTDWAYDCYAERRIDILVEKDKEAMADIGRLKKWVMIAIWCIQEKQEARPSMKIVMQMLEGLVEVPNPPLPSSFSSIMI 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00604 790 SUPERFAMILY Protein kinase-like (PK-like) 478 784 IPR011009 -
Accr9g00604 790 SMART serkin_6 496 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00604 790 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 30 782 - -
Accr9g00604 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 16 141 - -
Accr9g00604 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 160 IPR036426 -
Accr9g00604 790 Pfam S-locus glycoprotein domain 244 319 IPR000858 GO:0048544
Accr9g00604 790 ProSitePatterns Protein kinases ATP-binding region signature. 502 528 IPR017441 GO:0005524
Accr9g00604 790 ProSiteProfiles Bulb-type lectin domain profile. 19 141 IPR001480 -
Accr9g00604 790 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 778 - -
Accr9g00604 790 Gene3D - 21 141 IPR036426 -
Accr9g00604 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Accr9g00604 790 Gene3D Transferase(Phosphotransferase) domain 1 576 778 - -
Accr9g00604 790 Pfam Protein kinase domain 499 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00604 790 PIRSF SRK 1 789 IPR024171 GO:0004674
Accr9g00604 790 Pfam D-mannose binding lectin 71 158 IPR001480 -
Accr9g00604 790 SMART blect_4 25 143 IPR001480 -
Accr9g00604 790 ProSiteProfiles Protein kinase domain profile. 496 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00604 790 Gene3D Phosphorylase Kinase; domain 1 462 575 - -
Accr9g00604 790 CDD STKc_IRAK 502 773 - -
Accr9g00604 790 FunFam S-receptor-like serine/threonine-protein kinase 468 575 - -
Accr9g00604 790 CDD PAN_AP_plant 336 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00604 Accr-Chr9 6990613 6992985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00604 445 776 Receptor kinase-like Gene Family AT1G56120 40.762 1.20e-69 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr9g00604 Pkinase 6.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00604 - - lja:Lj2g3v1989170.1 932.554