Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00602 ATGGTTATTCCCAATATCTTCTTCCTTTTCTTGCTTCACTTTCATCATTTGGCTTTTGGAAACGTTGCTTTGAACACAATACTCTCCACCAACGATCAAAATGCTCCATGGCTCTCCCCTTCCGGCGAATTCGCTTTCGGATTTCGCCGAATCGAGAACACAAATCTCTTTCTGCTTGCCATCTGGTTCAACAATATACCTAGCAAAACGATTGTCTGGTATTCAAACATGCCAAACCCAGCAGTACCAGCAGGATCGCGTGTTCAGCTCACACCAACAGGTCTCAGTCTCACTAACCCCCAAGATCAAGCCACGTGGAAAACTGGTGAACTCCAAGGAGATGTGTCCTATGCAGAAATGCGTGACGATGGAAATTTTGTTCTGGCATCCTCAAATTCTTCCTATTTGTGGCAAAGTTTCAACAATCCCACCGATACACTGTTACCAAACCAAACTCTTCCTCTCAACGGCATGTTGTCTTCTCGCTTTTCACAAACGAATTACACAAAGGGAAGGTTTGAGCTTTATTTCAATGAAGTCATATTCTTGTTAAGTCAGATTGCATGGCCAACCGAATTTCGTTACAACCCATATTATGAATTTGATGCAACTTCAAATGACTCTGTTTCAGGACTAGTCTTTAATTCTTCAGGCATCATGTATATAGGTCAAACACGTGTATGGGACAACTTAGTTCTTGATGTTAGAAGAAATTATTACAGGGCTACACTTGATTATTATGGAGTTTTTACATTGTATTCCCATCCAAAGGAATCCAATGAAGCTCAAGTTTGGTCCGTTGCGGGGTATGTTCCCAATAACATTTGCGAAACAATATTTGGCGAAATGGGTAGTGGTTCGTGTGGCTACAATAGCTACTGCTCTTGGGATGACAACAACAAGAGGCCAACATGTACGTGTCCAAAAGGATATTTCTTGGTAGATCCAAACGACAATTTTGGAGGATGCCAACCTGATTTGCCCCTTGGTTGTGGAGCCGATGATGTGCGGTCACGAGAAAGTCCACAAGACGTATATGACGTGGAGCCTTTGCAAAGCGTGAACTGGCCTCTTGGAGATTATGAGAGGTTGGTCAGTTATTCCCAGGATGAATGTAAAATATCTTGCTTGAATGATTGTAATTGTGCGGTTGCTATCTCTAACACTGCAAAGGATTGTTGGAAGAAAAGATTGCCCCTTTCTAACGGAAAATTCTCTGCAAGCAGTGAGAGTGGAACAACAGCGCTCTTAAAGATTAGAATTCAACCACTGGCTAATCTTAACCATCCTTCTTGGAAACCCGCTTTGATTGGCTCGCTTATTGGGTCCCTTGTCATTATTGCTCTATTGGTAGCCACTTGTGTTGCCATTATTCTCATGAAGCCAAAAAAGACTACTCATCATGTTTCAAGTCTTGTCGAGACAAATATGAATTCTTTCTCATACGAAGCACTGAAGGAGGCAACAAATGAGTTTAATGAAGAAGTAGGAAGGGGTTCCTTTGGCATTGTGTACAAAGGCACCCTCAATTCAATGACCAATACTGTCATTGCAGTAAAAAGATTGGAGAGATTGGCTGAAGAACGAGAGAAGGAGTTTAGGAATGAATTGAGAGCTATTGGGAACACATGCCACAAAAATCTGGTCCGGTTGGTTGGGTTCTGTGACGAGGGAATTCATAGACTTCTGGTGTATGAGTTCATGAACAATGGTAATCTCGCAGATATTCTCTTTGGAAAATTCAAACCCCATTGGAATCAAAGGGTCAACCTTGCTTTGGGAATTGCAAGGGGATTGCTCTACTTACATGAAGAGTGTGACACTCCTATTATTCATTGTGATATAAAACCTCAAAACATACTGATAGATGAACATTTGAGGGTAAAAATCTCAGATTTTGGGCTGGCCAAGTTGTTGCATTTCAATCAGAGTCAAACTCACACAATGATGAGAGGAACGGTGGGGTATATAGCACCAGAATGGTTCAAAAATGTTTCAGTGACGGCTAAAGTAGATGTGTATAGTTATGGTGTGATGCTGCTAGAGATAATTAGTTGTAGAAGAAATGTGGAAAAGCAAATGGGTGAAGTGGACGAAGAAGAAGCAATACTGACGGATTGGGCTTATGATTGCTATATGGAGGGAAGAATAGACAATCTGGTAGAGAACGATGAGGAGGCCATGGCTGACATAGGGAGGTTGAAGAAGTGGGTGATGATAGCAATATGGTGCATTCAAGAGAATCCTGATGTGAGGCCAAGCATGAAGACTGTGATGCAAATGTTAGAAGGCCTCGTTGACATTCCAAATCCACCGCCGCCGCCTTCCTTCGACACAAATGTTTGA 2346 0.4203 MVIPNIFFLFLLHFHHLAFGNVALNTILSTNDQNAPWLSPSGEFAFGFRRIENTNLFLLAIWFNNIPSKTIVWYSNMPNPAVPAGSRVQLTPTGLSLTNPQDQATWKTGELQGDVSYAEMRDDGNFVLASSNSSYLWQSFNNPTDTLLPNQTLPLNGMLSSRFSQTNYTKGRFELYFNEVIFLLSQIAWPTEFRYNPYYEFDATSNDSVSGLVFNSSGIMYIGQTRVWDNLVLDVRRNYYRATLDYYGVFTLYSHPKESNEAQVWSVAGYVPNNICETIFGEMGSGSCGYNSYCSWDDNNKRPTCTCPKGYFLVDPNDNFGGCQPDLPLGCGADDVRSRESPQDVYDVEPLQSVNWPLGDYERLVSYSQDECKISCLNDCNCAVAISNTAKDCWKKRLPLSNGKFSASSESGTTALLKIRIQPLANLNHPSWKPALIGSLIGSLVIIALLVATCVAIILMKPKKTTHHVSSLVETNMNSFSYEALKEATNEFNEEVGRGSFGIVYKGTLNSMTNTVIAVKRLERLAEEREKEFRNELRAIGNTCHKNLVRLVGFCDEGIHRLLVYEFMNNGNLADILFGKFKPHWNQRVNLALGIARGLLYLHEECDTPIIHCDIKPQNILIDEHLRVKISDFGLAKLLHFNQSQTHTMMRGTVGYIAPEWFKNVSVTAKVDVYSYGVMLLEIISCRRNVEKQMGEVDEEEAILTDWAYDCYMEGRIDNLVENDEEAMADIGRLKKWVMIAIWCIQENPDVRPSMKTVMQMLEGLVDIPNPPPPPSFDTNV 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00602 781 Coils Coil 519 539 - -
Accr9g00602 781 PIRSF SRK 1 781 IPR024171 GO:0004674
Accr9g00602 781 FunFam S-receptor-like serine/threonine-protein kinase 460 567 - -
Accr9g00602 781 ProSitePatterns Protein kinases ATP-binding region signature. 496 520 IPR017441 GO:0005524
Accr9g00602 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 17 141 - -
Accr9g00602 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 568 770 - -
Accr9g00602 781 Gene3D - 24 142 IPR036426 -
Accr9g00602 781 Gene3D Transferase(Phosphotransferase) domain 1 568 769 - -
Accr9g00602 781 Pfam Protein kinase domain 492 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00602 781 CDD STKc_IRAK 496 765 - -
Accr9g00602 781 Gene3D Phosphorylase Kinase; domain 1 453 567 - -
Accr9g00602 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 176 IPR036426 -
Accr9g00602 781 ProSiteProfiles Bulb-type lectin domain profile. 24 141 IPR001480 -
Accr9g00602 781 SMART serkin_6 490 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00602 781 Pfam D-mannose binding lectin 70 156 IPR001480 -
Accr9g00602 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Accr9g00602 781 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 27 774 - -
Accr9g00602 781 SUPERFAMILY Protein kinase-like (PK-like) 467 763 IPR011009 -
Accr9g00602 781 SMART blect_4 28 143 IPR001480 -
Accr9g00602 781 ProSiteProfiles Protein kinase domain profile. 490 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00602 Accr-Chr9 6913208 6915553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00602 476 764 Receptor kinase-like Gene Family AT1G60800 40.541 1.08e-68 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr9g00602 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00602 - - gmx:100775269 857.44