Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00601 ATGTCTATTACCACTATCTTCTTCTTGGCCCTTTTCTTGCTTCACTTTCATCATTTGACTTTTGGAAACGTTGCTTTGAATACAATACTCTCCACCATCGATCAAAATGCTCCATGGCTCTCCCCTTCAGGCGAATTCGCTTTCGGATTTCGCCGAATCGATAACACAAATCTCTTTCTGCTTGCCATCTGGTTCAACAATATACCTAGCAAAACCATTGTCTGGTATGCAAACATGCCAAATCCAGCAGTACCAGCAGGATCGCGCGTTCAGCTCACACCAACAGGTCTCTATCTCACTAACCTCCAAGGTCAAGCCATGTGGACAACTGGTGAACTCCAAGGGGATGTGTCCTATGCTGAAATGCGTGAAGATGGAAATTTTGTTTTGGCATCCTCAACTTCTTCCAATTTGTGGCAAACTTTCACCAATCCCACTGATACACTGTTACCAAACCAAACTCTGCCTCTCAACGGCATGTTGTCTTCTCGCATTTCACGAACGAATTACACAAAGGGAAGGTTTGAGCTTTATTTCAATGGTGTCAAATTCTTGTTAAGTCAGATTGCATGGCCAACCGAATTTCATTACAACCCATATCATGGATTTGATGCAGCTTCAAAAGACTCTGTCTCAGGACTAGTCTTTAATTCTTTAGGCAATATGTATATAGGTCAAAAACGTGTATGGGGCAACTTAGTTCTTGATGTGAGTAGAAATTATTACAGGGCCACACTTGATTATTATGGAGTTTTTACATTGTATTTCCATCCAAAGGAATCCAATAAGGCTCAATTTTGGTCAGTTGTGGGGTATGTTCCCAATAACATTTGCGAAGCAATATTTAGCGAAATGGGTAGTGGTTCGTGTGGCTACAATAGCTACTGCTCTTGGGATGACACCAACAAGAGGCCAACATGTAAGTGTCCAGGAAGATATTCTTTGGTAGATCCAAACGACGAATTTGGAGGATGCAAACCTGATTTCTCCTTTGGCTGTGGAGCTGATGATGAACGATCACAAGAAAATCCAGAAGAGGTATTTGAGATGAAGCCTTGGCCAAATGTGAATTGGCCTCTTGGAGACTATGAAAGGTTGATCAATTATACCCTGGATGAATGTAAAAGATCTTGCTTGTATGATTGCAATTGTGCAGCTGTTATCCCTAACCATGCAAAGGATTGTTGGAAGAAAAGATTTCCCCTTTCTAACGGAAGATATGTAAACGACCATGGAATACCAGCATACTTGAAAACAAGAATTCAACCATTGGGTAATCTTAATCCTCCTCGGCTCCAACCTGCTTTATTATTTGGGTCGCCAATTGGCTCCCTTGTTGTCGCTCTGTTGGTAGCCACAGCTGTATCAATTATTCTGTTGAAGTCCAAAAATGGTGTTCAAGTTTCAAGCTTTGATGAAACAAATATGCACTCTTTCACATATGAAGCACTGAAGGAGGCAACACATGGGTTCAATGAAGAAGTGGGAAGGGGTTCATTTGGCATTGTGTACAAAGGCACCCTCAAATCAGCAACCAATACAGTTGTTGCAGTTAAGAGATTGGATAGGGTGGCTCAAGAACGAGATAAGGAATTTAAGAATGAGTTGAGTGCTATTGGGAAAACATGCCACAAAAATTTGGTTCGGTTGATTGGGTTTTGTGACGAGGGAGTTCAGAGAGTACTAGTGTATGAGTTTATGAGCAATGGTAGTCTAGCAGATATTCTCTTTGCAAAATTCAAACCCAATTGGAATGTTAGGGTTAACTTTGCTTTGGGAATTGCAAGGGGCCTACATTACTTACACGAAGAATGTGACACTCCTATTATTCATTGTGATATAAAACCTCAAAACATACTGATAGATGAAAATATGAGGGCAAAAATCTCAGATTTTGGGTTGGCCAAGTTGTTGTATTCTGATAAGAGCGGAACTCTTACAATGATAAGAGGAACAAGAGGATATGTAGCACCGGAATGGTACAAGAATACTCCAGTGACAACTAAGGTGGATGTTTATAGCTATGGGGTCATGCTACTCGAGATAATTTGTTGTAGAAAAAGTGTGGAGATGGATTTGGATAAAGTCGAGAAAAGCAAGGCAATACTGACAAATTGGGCTTATGATTGCTATATGGAGAGAAGAATAGAGGTTCTGGTAGAGAGTGATGAGGAGGCCTTGGCTGACATTGGGAGGGTGAAGAAATGGGTGATGATAGCAATATGGTGCATTCAAGATAATCCAGAAATAAGGCCTAGCGTGAAGACAGTGATGCACATGTTGGAAGGCCTTGTTGAAGTTCCAAGTCCTCCATCACCTTCTTCCTCCTCCCTCTCAATGGTTTGA 2346 0.4122 MSITTIFFLALFLLHFHHLTFGNVALNTILSTIDQNAPWLSPSGEFAFGFRRIDNTNLFLLAIWFNNIPSKTIVWYANMPNPAVPAGSRVQLTPTGLYLTNLQGQAMWTTGELQGDVSYAEMREDGNFVLASSTSSNLWQTFTNPTDTLLPNQTLPLNGMLSSRISRTNYTKGRFELYFNGVKFLLSQIAWPTEFHYNPYHGFDAASKDSVSGLVFNSLGNMYIGQKRVWGNLVLDVSRNYYRATLDYYGVFTLYFHPKESNKAQFWSVVGYVPNNICEAIFSEMGSGSCGYNSYCSWDDTNKRPTCKCPGRYSLVDPNDEFGGCKPDFSFGCGADDERSQENPEEVFEMKPWPNVNWPLGDYERLINYTLDECKRSCLYDCNCAAVIPNHAKDCWKKRFPLSNGRYVNDHGIPAYLKTRIQPLGNLNPPRLQPALLFGSPIGSLVVALLVATAVSIILLKSKNGVQVSSFDETNMHSFTYEALKEATHGFNEEVGRGSFGIVYKGTLKSATNTVVAVKRLDRVAQERDKEFKNELSAIGKTCHKNLVRLIGFCDEGVQRVLVYEFMSNGSLADILFAKFKPNWNVRVNFALGIARGLHYLHEECDTPIIHCDIKPQNILIDENMRAKISDFGLAKLLYSDKSGTLTMIRGTRGYVAPEWYKNTPVTTKVDVYSYGVMLLEIICCRKSVEMDLDKVEKSKAILTNWAYDCYMERRIEVLVESDEEALADIGRVKKWVMIAIWCIQDNPEIRPSVKTVMHMLEGLVEVPSPPSPSSSSLSMV 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00601 781 SUPERFAMILY Protein kinase-like (PK-like) 465 762 IPR011009 -
Accr9g00601 781 Gene3D Transferase(Phosphotransferase) domain 1 567 769 - -
Accr9g00601 781 SMART serkin_6 489 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00601 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 19 143 - -
Accr9g00601 781 SMART blect_4 30 145 IPR001480 -
Accr9g00601 781 Pfam Protein kinase domain 492 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00601 781 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 567 769 - -
Accr9g00601 781 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 30 773 - -
Accr9g00601 781 ProSitePatterns Protein kinases ATP-binding region signature. 495 519 IPR017441 GO:0005524
Accr9g00601 781 Pfam D-mannose binding lectin 72 158 IPR001480 -
Accr9g00601 781 PIRSF SRK 1 780 IPR024171 GO:0004674
Accr9g00601 781 ProSiteProfiles Bulb-type lectin domain profile. 24 143 IPR001480 -
Accr9g00601 781 ProSiteProfiles Protein kinase domain profile. 489 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00601 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 147 IPR036426 -
Accr9g00601 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Accr9g00601 781 Gene3D - 28 145 IPR036426 -
Accr9g00601 781 FunFam S-receptor-like serine/threonine-protein kinase 460 566 - -
Accr9g00601 781 CDD STKc_IRAK 495 764 - -
Accr9g00601 781 Gene3D Phosphorylase Kinase; domain 1 452 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00601 Accr-Chr9 6908967 6911312 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00601 443 773 Receptor kinase-like Gene Family AT4G18250 37.861 4.24e-68 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr9g00601 Pkinase 8.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00601 - - gmx:100775269 844.343