Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00588 ATGGGAAAGCAAGGTCCTTGCTATCACTGTGGAGTTACAAGCACACCCCTTTGGCGCAATGGCCCGCCGGAGAAACCAGTATTATGCAATGCTTGTGGTTCTCGATGGAGGACAAAGGGAACACTTGCAAATTATACTCCATTACATGCCCGGACAGATACTGATGATTGTGAGGATCAAAGGTTTTCAAGGGTAAAGAGCATATCACTAAATAAGAACAAAGAAGTGAAATTGTCTAAACGAAAGCTGAATGAAGATAATTTATTCACTGGAGTGGCTGGCCTTGAATACAACCAAGGTTTTCGAAAGTCTACAGATGAAGATACAAGTAATAGATCAAGTTCAGGATCAGCTATCTCTAACTCAGAGAGTTGCGCTCAATTTGGCGGCACTGATGCCAGTGATCTGACAGGTCCTGCTCAGTCAATTGTCTGGGATGCCATGGTGCCTTCAAAGAAGAGGACATGTGTGGGTCGTCCAAAGCAATCTTCTGTTGAAAAGCTTACAAAAGATCTGTACACTATACTTCATGAACAACAGTCTTATTTTTCAGCATCATCTGAAGAGGATCTTCTTTTTGAAAGTGAAACACCAATGGTCTCTGTTGAGATAGGGCATGGAAGTGTTCTTATTAGGCACCCGAGCTCTATAGCTCGTGAAGAAGAGTCTGAGGCCAGCTCTCTTTCAGTTGATAACAAACGGTGCCCAACCAGTGAGGCGTATTCATGTTCTGGTACCGGTTTTGTGCATAATGGATATGGCGGTGTGAACTTTCCATCTGTGGGGATTCAAAAGATCAGGAACTCTGCTGGCCAAGAAATGCTGCAAGAGCAACTTAGGAGGGACAAGAGTCAACATGATAAGGCTCAAATCCTTGGAAATAAGTCGCCACTGTGCTTGGTGGATTTAAATGATGTCATTAACTATGATGAATTTATGAGGACCTTGACAAATGAAGAGCAGCAACAGTTACTGCAGTGTCTCACTGCAGTTGATACTACTAAACTTCCTGATAGCCTGAAAAGCATGTTCAGTAGCTCTCAATTCAAGGAGAACTTGAATTATTTTCAGCAGCTTCTTGCAGAAGGTGTCTTTGATATCTCCTTATCAGGGACAAAACCTGAAGACTGCAGGACTTTGAAAAGGCTAGCATTATCCAATCTGTCAAAATCAAAATGGGTGGAACATTATAACTTACTTAAGAAAAATAAGAACGGAGCTGGAAAATCTGTTGCTTTGGTTTCTTCTGGCACTGCATCTACTAATGCTGCAAATGGCAAGAGATATCATGATAGCCAAAGTAAAAATTTATCAGAATTAAAGACAACGATGAGGAGTCCTAAAAGGGTGATGATGAAGGTTGGCTGTGAGGGCAAGGAAGCTGAAGAATATGGTTCTTGTTTCAGTCCAAAAAGCCTATTTACTTTGCCTTCTGATGGTGAGGCCCTCATGCTGGACTCTTTCAATTTTGTTGAGGGGAGTGGTGATCAGGACCTGCTGCTAGAAGTGCCATCTAACGGTTCTTTTCCCGAGGCAGAGCTTCTGCACCCAACTTTAAGCTTTTGTGCTCAAGCCAGCACCAGTAGTAGCTCAGTATACCCTCATATTCTCCATCCCTGA 1620 0.4272 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARTDTDDCEDQRFSRVKSISLNKNKEVKLSKRKLNEDNLFTGVAGLEYNQGFRKSTDEDTSNRSSSGSAISNSESCAQFGGTDASDLTGPAQSIVWDAMVPSKKRTCVGRPKQSSVEKLTKDLYTILHEQQSYFSASSEEDLLFESETPMVSVEIGHGSVLIRHPSSIAREEESEASSLSVDNKRCPTSEAYSCSGTGFVHNGYGGVNFPSVGIQKIRNSAGQEMLQEQLRRDKSQHDKAQILGNKSPLCLVDLNDVINYDEFMRTLTNEEQQQLLQCLTAVDTTKLPDSLKSMFSSSQFKENLNYFQQLLAEGVFDISLSGTKPEDCRTLKRLALSNLSKSKWVEHYNLLKKNKNGAGKSVALVSSGTASTNAANGKRYHDSQSKNLSELKTTMRSPKRVMMKVGCEGKEAEEYGSCFSPKSLFTLPSDGEALMLDSFNFVEGSGDQDLLLEVPSNGSFPEAELLHPTLSFCAQASTSSSSVYPHILHP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00588 539 FunFam GATA transcription factor 27 3 85 - -
Accr9g00588 539 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 294 406 IPR044867 -
Accr9g00588 539 Gene3D - 3 86 IPR013088 GO:0006355|GO:0008270
Accr9g00588 539 Pfam Asx homology domain 291 366 IPR028020 -
Accr9g00588 539 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Accr9g00588 539 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Accr9g00588 539 MobiDBLite consensus disorder prediction 110 124 - -
Accr9g00588 539 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Accr9g00588 539 MobiDBLite consensus disorder prediction 100 124 - -
Accr9g00588 539 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Accr9g00588 539 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Accr9g00588 539 Gene3D - 283 382 IPR038108 -
Accr9g00588 539 CDD ZnF_GATA 6 52 IPR000679 GO:0006355|GO:0043565
Accr9g00588 539 PANTHER OSJNBB0038F03.10 PROTEIN 1 533 IPR044589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00588 Accr-Chr9 6796028 6801682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00588 1 516 C2C2-Gata Transcription Factor Family AT4G17570 55.303 2.24e-170 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr9g00588 ASXH 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00588 - - gmx:100798504 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00588 9 6796028 6801682 Accr10g00365 10 5769719 5774784 CCT