Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00564 ATGACTTCCAGCGTCGAAGGAAGCGATTTAGCTGAGGTATCTTGTGAGTCTGCAACAACCATGGACTTGTTTCCTACCAAGGAGAACAGCAGAACACCACAAAACTTTTCTACGATGAACTTATTTCCGCATCTCTCTACAGAAGAGATTCCAAAGATGGCAAATTCCAGTGTATCTAAGCCTGTCACTAAGGAGCCCAGAGCTCCACAGATGACAGTCTTTTATGGTGGCCAAGTTGTTGTGTTCGATGATTTTCCTGCTGAAAAAGTCATGGAGATATTGGCCCTTGCCAGCAAAGGAACACCCCTTATACAGAACAGCTTTGGTTATGCTTTTCCTCAGAGCCAGCCATCGTTTCCTCATAATGCAACTACATTTTCTTCGGATTCCCAAAAGCCAGTTTCTCCTAATGTAAATATCGTTCCTAATATTTGCAACACTTTGGTTCAAGGGCGCCCTCAGTCACCATCTAGACCTGTGGTTGGTGACCTTCCGATTGCTAGGAAAGCATCACTTCATCGGTTCTTAGAGAAGAGGAAGGGCAGGATTGCTGCTAGAGCACCGTATCAAACAAGCAACCCCATGGTAGCTCCAAATAAGTCAACTGAATCAATGACATGGCTTGAATTGGCTGCAAAGCCGACCAACATCTGA 654 0.4495 MTSSVEGSDLAEVSCESATTMDLFPTKENSRTPQNFSTMNLFPHLSTEEIPKMANSSVSKPVTKEPRAPQMTVFYGGQVVVFDDFPAEKVMEILALASKGTPLIQNSFGYAFPQSQPSFPHNATTFSSDSQKPVSPNVNIVPNICNTLVQGRPQSPSRPVVGDLPIARKASLHRFLEKRKGRIAARAPYQTSNPMVAPNKSTESMTWLELAAKPTNI 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00564 217 SMART tify_2 64 99 IPR010399 -
Accr9g00564 217 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 25 195 IPR040390 -
Accr9g00564 217 ProSiteProfiles Tify domain profile. 64 99 IPR010399 -
Accr9g00564 217 Pfam Jas motif 165 190 IPR018467 -
Accr9g00564 217 Pfam tify domain 66 98 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00564 Accr-Chr9 6488022 6489407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00564 19 213 Tify Gene Family AT1G19180 37.799 7.72e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr9g00564 tify 5.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00564 K13464 - gmx:100801449 209.92