Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00531 ATGGTTTGTACTGCCAATGATTTACAAAGCTGGAAAGATTTTCCCAAGGGACTTAGGGTTCTTCTCCTTGATGGGGACACCAATTCTGCTGCCGATATAAGGGCCAAGCTTGAGGCCATGGACTATATTGTTTCTATATTCTGCAATGAAAATGAAGCCTTGTCGGCGATCTCAAGCAAACCTGAAGGCTTCCATGTTGCCATTGTGGAGGTTAGTACAAGCAATAACCAGGGGTGTTTCGAATTTCTTGAGAATGCGAAGGACTTGCCAACCATTATGACTTCAAATGATCATTGCCTTAGCACCATGATGAAGTGTATAGCACTTGGTGCAGTTGAGTTCCTAAGAAAACCACTCTCTGAGGAAAAGCTCAGGAATATCTGGCAGCATGTTGTTCACAAGGCATTTAATGCTGGGGCAACTGTCCTGCCTGAATCAATAAAACCCATCAAAGAATCCGTGGTATCGATGTTGCGGCTCCAAACAGACAACAAGGAACAGCAAAGTAAAATCTCTTTAGATATAGAGAAAGTATCGAGATTTAGTGAAAATGACCATGAGCTGTCATCTGGGAGTGATAATAAATACCCGGCTCCTTCAACTCCACAATTAAAACAGGGGCTTAGATTACTGGATGATGGTGATTGCCATGAACAGACTCATTGCTTGACTGAGAAAGAGAGTGGAGAACCGGATGGGGAAACTATATCTGTCGAAACTACATGTGGGAATTCAAATTCTGAGGGCGCTGCGCCTCAACCAAGTAAGCCTGAAATGACCCTAGCCAAGAAGGAAGAGGACTTTGCCAATGGTTCTAAGAGTGAGAGTGATGTTTCTACACATATTCATGATGGAAATTTTGTCAGCATCAATGATGATATTACTCCATCTCCAAAAGAAGTTGGTGTTTTCAGTGATGCATGTGAGATCACAGCTAGTAAAAAGAAATCAAAGAAGATGAAGGTAGACTGGACGCCTGAACTTCACAACAAATTTGTTCAGGCAGTGGAACAACTTGGTATTGATCAGGCCATACCTTCTCGAATACTGGAGCTAATGGAAGTGGAGGGATTGACTAGGCATAATGTGGCTAGCCATCTTCAGAAATATAGAATGCACAAGAGACATATCTTGCCCAAAGAAGAAGATCGAAGGTGGCCAAATCAAAGAGATATAATGCAAAGGAGCTATTATGTACCGAGACCAACTATGGCCTATCCTCCATATCATTCTAATCACACCTTATCTCCAGCTCCTATATATCCTATGTGGGGACAACCAGGAAGTCAACCGGCTGGTGTACAGATGTGGGCGCCCCCTAACTATCACATATGGCAGCCTTTTCCAGGGATGCATGCAGAAGCATGGGGTTGCCCCGTGTTGCCACCTTCTCAAAATCCTAGCTTTTTCCACACTCAACATACACCTGGATTGCGTAGTGCTAATAACGTTGAGTATAACCCAAGCATGCCTCCAAGTTCGTTAGAGCATCATCCGGCAGATGAAGTTGTTGATAAGGTTGTAAAGGAAGCAATAAGCAAGCCCTGGCTGCCCTTGCCCTTAGGACTCAAACCTCCTTCCACAGATAGTGTATTGGCTGAACTCTCTAGGCAAGGCATATCTACCATCCCTCATAGTTCTAAATCCACATAA 1653 0.4368 MVCTANDLQSWKDFPKGLRVLLLDGDTNSAADIRAKLEAMDYIVSIFCNENEALSAISSKPEGFHVAIVEVSTSNNQGCFEFLENAKDLPTIMTSNDHCLSTMMKCIALGAVEFLRKPLSEEKLRNIWQHVVHKAFNAGATVLPESIKPIKESVVSMLRLQTDNKEQQSKISLDIEKVSRFSENDHELSSGSDNKYPAPSTPQLKQGLRLLDDGDCHEQTHCLTEKESGEPDGETISVETTCGNSNSEGAAPQPSKPEMTLAKKEEDFANGSKSESDVSTHIHDGNFVSINDDITPSPKEVGVFSDACEITASKKKSKKMKVDWTPELHNKFVQAVEQLGIDQAIPSRILELMEVEGLTRHNVASHLQKYRMHKRHILPKEEDRRWPNQRDIMQRSYYVPRPTMAYPPYHSNHTLSPAPIYPMWGQPGSQPAGVQMWAPPNYHIWQPFPGMHAEAWGCPVLPPSQNPSFFHTQHTPGLRSANNVEYNPSMPPSSLEHHPADEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRQGISTIPHSSKST 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00531 550 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Accr9g00531 550 SUPERFAMILY CheY-like 16 134 IPR011006 -
Accr9g00531 550 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 316 375 IPR017930 -
Accr9g00531 550 MobiDBLite consensus disorder prediction 234 253 - -
Accr9g00531 550 Gene3D - 315 377 - -
Accr9g00531 550 MobiDBLite consensus disorder prediction 222 258 - -
Accr9g00531 550 MobiDBLite consensus disorder prediction 182 206 - -
Accr9g00531 550 FunFam Two-component response regulator-like APRR2 17 143 - -
Accr9g00531 550 FunFam Two-component response regulator 315 378 - -
Accr9g00531 550 Pfam Myb-like DNA-binding domain 322 371 IPR001005 -
Accr9g00531 550 SUPERFAMILY Homeodomain-like 318 376 IPR009057 -
Accr9g00531 550 Gene3D - 18 140 - -
Accr9g00531 550 NCBIfam myb-like DNA-binding domain, SHAQKYF class 319 374 IPR006447 GO:0003677
Accr9g00531 550 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 546 IPR044825 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00531 Accr-Chr9 6044815 6049258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00531 1 547 Response Regulator Gene Family AT4G18020 49.567 2.07e-144 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Accr9g00531 Myb_DNA-binding 2.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00531 - - gmx:100784905 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00531 9 6044815 6049258 Accr10g00315 10 5238822 5243186 CCT