Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00517 ATGGGAAGCGGACTTTCTAGCCTCCTTCCTTGCTGCAAACCGGCTAACCGGACCACCAGTCAGCCGGATCAACAGGAAGTGATCTTTCCCGCCACTGAGCCCTTGGATGATGAAACCCTAGGCCACTCCTTCTGCTACGTTAGATCTTCTGCTCGCTTTCTTTCCCCCACTCACTCGGATCGATTCGTCTCGCCTTCTAACTCCCTCCGCTTTTCTCCATCTCATGAACCCGTATCGAGAACCCGACCCGATTTGCCCGAACCCGTCTTCAAGGCCATTTCCGGAGCTTCCGTCAGCGCTAACAGTTCTACTCCCAAAACTGTTCTCCAGCTCGACAATACCCACGATGATGTTGCCGACTGTACCGCTGGTGGTGGCGCGAGGGGGAACATTGTGAATGGCTTCGAGAGCACCTCGTCATTTAGTGCTCTCCCGCTTCAGCCAGTTCCCCGGGGAGGTGACCCCTCAGGTCCGGTAGATAGGGGAGCCTTCTTTCTATCTGGCCCAATTGAGCGCGGCGCCCTCTCTGGGCCTCTCGAACCCAGCGCCAACACCGAAGGTGGAGGCGGCGTTCCTTTCTCGGCGCCTCTTGGTGGCTTTTATGTCAAAAAGAAGCGGAAAAGGAGCATTTCAGGGTTTCGGAAGGCATTCCATGGGAACCTTTCGGAGAAGAAGCGGCCGTGGGTTGTGCCAGTGTTGAATTTCGTAGGTAGAAAGGATGTTCCGCCAAGCGAAGAGAAATCAGAGATAAAGAGTGAGAGTAATGTACAGTGGGCACTTGGGAAGGCGGGAGAGGATCGGGTTCATGTAGTTGTCTCGGAAGAGCACGGCTGGTTGTTTGTTGGGATATACGACGGCTTCAATGGCCCTGACGCGCCGGAATTTCTGATGGGTCATCTTTACCGTGCAGTGTACAATGAATTACAGGGTCTGTTTTGGGAAGCTGAAGAAGCGGAGGAAACTAACCCATCGACCGCGCCTGCGGAGAATGCATTACCTGGAGAACAATCTGAACCATCGATTGAAATCTCCCACAGAGACTTAACAGATGCGGGGGGCGTATCTGTGAGTAGAGAGGACTTAAATTCTTTGCCGGTTGATCGAGAGTCAGCAAAGAGAGTAACGTTTCAAGCAGACGGAACGGAAAGTAGGCGGCGTAGGTTATGGGAGTTACTCGCCGAAGCTGATGCAGAAGACGGGCTTGATCTTTCAGGGTCAGATAGATTTGCATTTTCCGTTGACGATGCCCTGAGCGTAAGCAATGCGGGATCAGCAGTTAGCAGACGGTGGCTATTATTATCGAAGTTGAAACATGGATTATCAAAACATAAGGAGGGTCAAGGTAGCAAGTTGTTTCCCTGGAAACTCGGCACAGAAGATAAAGAGAAGGTTGAGGTAGAAAATCGGGCTGAAGAAAGGCCATCCCGTGGTAATAGGAGGCGGAAAGTGGGTCCCGTGGATCATGATTCGGTTTTGAGAGCTCTATCTCGGGCTCTTGAATTGACCGAACTTGCATACTTGGATATGACGGATAAGATTCTTGATACAAACCCGGAGATCGCTTTAATGGGGTCATGTCTGTTAGTTGTTTTAATGAGGGATGAAGATGTGTACGTGATGAATGTGGGAGATAGCCGAGCTATTGTGGCACAGTTTGAGCCCAAAGAGGTTGATCCTAGCGTGGAATTGGAGAACAAAGGAGATAAGGGGTCAAGCGCAGAGAGCATAGTTGAGGAGTCCTTAACTCCCGGTGAAAGCGCAAACAAGCCGGGGATTGAGGGTCCTGCTCAAGAAATGAGGTTGATTGCATTGCAGTTGTCCACGGACCACAGCACGAGCATTGAAGAGGAAGTCATTAGGATTAAGAATGAACATCCAGATGATAACCAATGCATTGTAAATGACAGGGTTAAAGGTCGTCTTAAGGTTACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCTAAGTGGAATGATCCTCTACTGGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCTGCCCTTCACTACGTCATCATAGATTATGCCCAAGAGATCAGTTCTTGATCCTCTCATCTGATGGGTTATATCAGTATCTAAGCAATCAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCTGATGGAGATCCTGCTCAACATTTGATTGAGGAGCTTCTCCTCCGTGCCGCGAAGAAAGCTGGAATGGATTTACATGACTTGTTGGATATCCCACAAGGCGATAGGAGGAAATACCATGATGATGTTACTGTCATGGTGATATCACTTGAGGGTCGAATCTGGAAATCATCAGGAAAGTATCTGTGA 2352 0.4919 MGSGLSSLLPCCKPANRTTSQPDQQEVIFPATEPLDDETLGHSFCYVRSSARFLSPTHSDRFVSPSNSLRFSPSHEPVSRTRPDLPEPVFKAISGASVSANSSTPKTVLQLDNTHDDVADCTAGGGARGNIVNGFESTSSFSALPLQPVPRGGDPSGPVDRGAFFLSGPIERGALSGPLEPSANTEGGGGVPFSAPLGGFYVKKKRKRSISGFRKAFHGNLSEKKRPWVVPVLNFVGRKDVPPSEEKSEIKSESNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGHLYRAVYNELQGLFWEAEEAEETNPSTAPAENALPGEQSEPSIEISHRDLTDAGGVSVSREDLNSLPVDRESAKRVTFQADGTESRRRRLWELLAEADAEDGLDLSGSDRFAFSVDDALSVSNAGSAVSRRWLLLSKLKHGLSKHKEGQGSKLFPWKLGTEDKEKVEVENRAEERPSRGNRRRKVGPVDHDSVLRALSRALELTELAYLDMTDKILDTNPEIALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQFEPKEVDPSVELENKGDKGSSAESIVEESLTPGESANKPGIEGPAQEMRLIALQLSTDHSTSIEEEVIRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDPLLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDLHDLLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00517 783 CDD PP2Cc 487 771 IPR001932 -
Accr9g00517 783 Pfam Protein phosphatase 2C 605 739 IPR001932 -
Accr9g00517 783 SMART PP2C_4 249 769 IPR001932 -
Accr9g00517 783 MobiDBLite consensus disorder prediction 558 593 - -
Accr9g00517 783 MobiDBLite consensus disorder prediction 316 339 - -
Accr9g00517 783 SUPERFAMILY PP2C-like 261 772 IPR036457 -
Accr9g00517 783 MobiDBLite consensus disorder prediction 465 484 - -
Accr9g00517 783 MobiDBLite consensus disorder prediction 558 573 - -
Accr9g00517 783 Gene3D - 238 778 IPR036457 -
Accr9g00517 783 ProSiteProfiles PPM-type phosphatase domain profile. 249 771 IPR001932 -
Accr9g00517 783 PANTHER PROTEIN PHOSPHATASE 2C 246 770 IPR015655 GO:0004722|GO:0006470
Accr9g00517 783 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00517 Accr-Chr9 5834282 5839486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00517 1 783 PP2C-type Phosphatase Gene Family AT2G35350 58.120 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00517 - - qsa:O6P43_024469 1202.58