Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00513 ATGGGAGGTGCGTCACTGCCACCAGGTTTTCGATTCCACCCGACTGATGAAGAACTTGTGGGATATTACCTAAAAAGGAAAGTGGAGGGTCTGGAAATTGAGCTTGAAGTTATACCCGTCATTGATCTTTACAAGTTTGATCCCTGGGAGTTACCTGAGAAATCATTCCTTCCAAAGAGAGATATGGAATGGTTTTTCTTCTGTCCCAGGGATCGAAAGTATCCAAATGGATCAAGGACAAACAGAGCAACCAAAGCGGGATACTGGAAAGCCACCGGAAAAGACAGAAAAATTGTGTGTCACTCTTCTCCTTCCTCTGTCACCGGTTACCGCAAGACTCTGGTTTTCTACTGTGGAAGAGCTCCTTTAGGAGATCGAACCAACTGGGTCATGCACGAGTATCGCCTCTGTGATGATCTTGCCTCAGGATCATCACCAAGCTTTCAGGGTGCTTTTGCTCTGTGCCGAGTGATGAAGAAGAATGAGAAACCAAATGATGAACAAAAGGGTAAAAAGGCTGGAAGCAGTTCTGTTAATGGGAGAGACAACTCAATGAGAATCTCAAATGAACCTTTTAGTGTATCTGGTGATGTTTCTTCACAAACAAGTCATCTGTACAATGAGAGTGGCCATTCGAGCCCTATTACTTCTCCCTCCAATGCGGTTCGGACGGCAGAGTTGGAGCAAGCTTCCATGGAGACTAATCCTTCAGATATCTGGATCTCTCCAGATTTTATTCTTGATTCTTCAAAGGACTATCCTGAAGTACAAAATGCAGTGTCTGAATACTTTCCACAGTATGAATTGTCAAGCTCAATGATGACCCCATGGCAGCCAATGGAACACACAGAAATTTCACCTTCTTCATCGTACTCAAACTTGAACGGGGAAATTGAATTTTCTGGTGATCTTAGTATGTCAACTTACATGGAACAAGCAAACTTCATGAACTTCTATGGAAATGGCCCTATGCCCTATGGAGGATTTGATCAGATCAATTCAACCACGTATCCTAGACATTTCTGA 1026 0.4337 MGGASLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKIVCHSSPSSVTGYRKTLVFYCGRAPLGDRTNWVMHEYRLCDDLASGSSPSFQGAFALCRVMKKNEKPNDEQKGKKAGSSSVNGRDNSMRISNEPFSVSGDVSSQTSHLYNESGHSSPITSPSNAVRTAELEQASMETNPSDIWISPDFILDSSKDYPEVQNAVSEYFPQYELSSSMMTPWQPMEHTEISPSSSYSNLNGEIEFSGDLSMSTYMEQANFMNFYGNGPMPYGGFDQINSTTYPRHF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00513 341 ProSiteProfiles NAC domain profile. 6 160 IPR003441 GO:0003677|GO:0006355
Accr9g00513 341 MobiDBLite consensus disorder prediction 171 225 - -
Accr9g00513 341 FunFam Nac domain-containing protein 86 15 163 - -
Accr9g00513 341 MobiDBLite consensus disorder prediction 162 225 - -
Accr9g00513 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 225 - -
Accr9g00513 341 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Accr9g00513 341 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Accr9g00513 341 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00513 Accr-Chr9 5806337 5807874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00513 1 308 NAC Transcription Factor Family AT4G17980 56.913 1.22e-113 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr9g00513 NAM 2.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00513 - - gmx:100796849 515.768