Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00511 ATGGGTTGCACTGGAAAGGAAAAACACATCCGAGCTAATCGAAAGTCTCAATCCGTCAAGCTAGATAATTGCTGTCTTCATAGAATTTCAATTTCCAAATCTATTATGGAATCAGGCCTCAGGCCACTGAAATACCGTCTGGGTAACGAAGATTCGACTCAAAGCCCGAATCCCGATTCACACCCTAAAATCAAACTTACTCCTCATGGCGAGGAATGTGGCTGGGGTTACTATACGGAAGAACACTTGGAAGAAATTCTAATGAAAAACTTGGAGTATTTATACAACGAGGCTATATCAAAGCTTGTTACGTTGGGGTATGACGAGGAAACTGCTTTAAAAGCAGTATTGCGAAATGGGCATTGTTATCATGGTGGGACGGATTTGCTGACAAATATTGTGCAGAACTCATTGGCTTATTTAAATAGTGATAGTGGTGGTGATAGTACTAGAACATGTAAAGACAATTCGGATGAGTCAGAGCCTGTCTTCTCAGACTTGAGGGAGTTGGAGGAGTACTCTCTTGCGGTTATGGTCTGTCTCTTGCAGCATTTAAGGCCTCATTTGAGTAAAGGTGATGCCATGTGGTGTTTACTTATGAGTGATCTTCATGTAGGAAAGGCAAATAAAATGGAAATCCCCATGCTTCCTGAGCCAGACGATAGTAATACTGCTTCTTCTATAGTCGAAACTGCTAACAATTCAGACATGACTTTACACAGAGATATTGAATTCCCAAAGCATTTCAATCTCCCTCCTTCTTTGAAGTCATTGTTGAAAAGAAATGTGGCAGTGTTTGCTGCTGGTTTAAGGGCAAATTCAAAACAATTGCAGACAAAAGCAAAAGCACGTCCCAGCAGTAGTTCTTCATCTATCTCGGATTCTCCTCCTGTTCTGGGGACTGAACCTCCAGTTGAGAATGAGAAGGCAGGGGATTCTCAGAATCAAAATAACCAAGATGCTGTGAATTCAATTCTTAGTAGATTTCGTGATCTAAATTTTGATGAGAATTTGGAGTCTCTGGCAGAAGATCAGAAGGATGAGATGACTTCCGCTATACTTCATCATATTAATGATCTTGAGAAACAGGTACAGGAGCGAAAAGATTGGGCTCATCTGAAGGCAATGCAAGCTGCAAGAAAGCTAAGCAGTGATCTGACTGAGCTGAAAATGTTAAGGATGGAAAGAGAAGAGGCTCAGAGATTGAGGGAAGGGAAACAGGCCCTTGAGGACACAACTATGAAAAGACTTTCAGAGATGGAGATTGAACTGAGAAAGGCTAGCAGTCAAGTGGACCGTGCCAATGCAGCAGTGAGGAGACTTGAAACTGAGAATGCAGAGATCAAAGCAGAGATGGAGGCTTCCAAGTTGAGTGCTGCAGAGTCAGTCTCAGCTTGCTTGCAAGTTGCAAAAAGAGAGAAAAAGTGCTTGAAGAGGCTTCTGGCTTGGGAAAAACAGAAAGCTAAGCTGCAGGAGGAGATTTCCGATGAGAAAGTTAAGATGCTGGAGGTGCACAAAATGTTGGGTCGGATTCAGCATTGCCAGAAAGAAGCTGAGATCAAGTGGAGGGAGGAGTTGAAGGCTAAAGAGGAAGCCTTAACACTCTTCAAGGAGGAAAAGAGATTGAAGGAAGAAGTAGATGCTAATAACAAGAGGAAGCTTGAGGCTTTGCGGTTAAAGATAGATATACATTTTCAGCGCCACAAGGATGATTTCCTCAGACTTGAACAGGAACTCTCACGTCTTAAAGCATCTGATCAACCTGCTAAGTTGCAGCTTCATCACCAACCAAATGGTTCACCAGCGGGTGAGTCGGAGGATGCAAAGCCCCAGAGAGAGACAATTGCAAAGATGCTTCAAGAATTAGATCAGTTGGAGGAAATTTCAAAGAAAGAAGAAAACTTTGATAGGGAATGCATTATATGTAGGAAAGATGAAGTGTCTGTTGTGTTCTTGCCGTGTGCACACCAAGTGATGTGTGGTAGGTGCAGTGATGAGTATTGGAGATGTGGCAACGCTCTTTGTCCTTGCTGCCATGTTTCAATCCAACAGATGATCCGTGTATTTGGGCCAACTTCGTAG 2082 0.428 MGCTGKEKHIRANRKSQSVKLDNCCLHRISISKSIMESGLRPLKYRLGNEDSTQSPNPDSHPKIKLTPHGEECGWGYYTEEHLEEILMKNLEYLYNEAISKLVTLGYDEETALKAVLRNGHCYHGGTDLLTNIVQNSLAYLNSDSGGDSTRTCKDNSDESEPVFSDLRELEEYSLAVMVCLLQHLRPHLSKGDAMWCLLMSDLHVGKANKMEIPMLPEPDDSNTASSIVETANNSDMTLHRDIEFPKHFNLPPSLKSLLKRNVAVFAAGLRANSKQLQTKAKARPSSSSSSISDSPPVLGTEPPVENEKAGDSQNQNNQDAVNSILSRFRDLNFDENLESLAEDQKDEMTSAILHHINDLEKQVQERKDWAHLKAMQAARKLSSDLTELKMLRMEREEAQRLREGKQALEDTTMKRLSEMEIELRKASSQVDRANAAVRRLETENAEIKAEMEASKLSAAESVSACLQVAKREKKCLKRLLAWEKQKAKLQEEISDEKVKMLEVHKMLGRIQHCQKEAEIKWREELKAKEEALTLFKEEKRLKEEVDANNKRKLEALRLKIDIHFQRHKDDFLRLEQELSRLKASDQPAKLQLHHQPNGSPAGESEDAKPQRETIAKMLQELDQLEEISKKEENFDRECIICRKDEVSVVFLPCAHQVMCGRCSDEYWRCGNALCPCCHVSIQQMIRVFGPTS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00511 693 Coils Coil 417 458 - -
Accr9g00511 693 ProSiteProfiles Zinc finger RING-type profile. 639 679 IPR001841 -
Accr9g00511 693 MobiDBLite consensus disorder prediction 275 297 - -
Accr9g00511 693 CDD RING-HC_MIP1-like 634 688 - -
Accr9g00511 693 Pfam Family of unknown function (DUF6592) 90 210 IPR046527 -
Accr9g00511 693 Coils Coil 473 500 - -
Accr9g00511 693 Coils Coil 565 585 - -
Accr9g00511 693 PANTHER OS05G0141500 PROTEIN 1 688 IPR046934 -
Accr9g00511 693 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 613 690 IPR013083 -
Accr9g00511 693 MobiDBLite consensus disorder prediction 275 318 - -
Accr9g00511 693 Pfam Zinc finger, C3HC4 type (RING finger) 636 685 - -
Accr9g00511 693 SUPERFAMILY RING/U-box 621 685 - -
Accr9g00511 693 MobiDBLite consensus disorder prediction 585 611 - -
Accr9g00511 693 MobiDBLite consensus disorder prediction 46 66 - -
Accr9g00511 693 Coils Coil 615 635 - -
Accr9g00511 693 Coils Coil 389 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00511 Accr-Chr9 5784053 5787598 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00511 9 5784053 5787598 Accr10g00301 10 5064165 5068314 CCT