Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00506 ATGGATTCTTGGCAGCCACCTCAGTCTTCGCGACCGTCACGCTCACAACAGCAACATTCATGGGCGCCACCACCAAACATTATGACGCCTCCTGGTTTTCCCTCCGCCATGCTCAACCCTATCGCTTCTTCCTTGATCAACCTCAATTCCTCGTCCATGTTGATGTCCCCTGCCACCGGCCGATTTCCGTTCCCCACATTTGCGTCACATTCCCGTTCTACTCCCCCTCCCGCCCCTCTCCTTCCTTCGCCTCCATCGAAGCCTTCAGAACCTCTGAGAACCACCACTTCTCCTTATGAAGGCTCCTCTGCGTTGGGACCTATTGATTCTCCGAAGAAGAAGAGAGGCCGACCCAAGAATTCTTCGCCGGATGGTAGCACTACTTTGGGTTTGGGTTCTACGCCTTTGTCTTCTTCTGCCCCCGCTGATTTGAGCCCCACGTCAGATGAACCACCAGCTAAAAAGAGGAGGGGAAGGCCGCCGGGCTCTGCAAAGAAGCAACGGGATGATCTTGGAGATGGCGGGACACACTTTACTCCACATGTAATCTTGGTGAATACTGGGGAGGACATTGCAACAAAGATTTCATCCTTTGGTGAAGAAGGATCACGTGTGGTCTTTATTTTTTCTGCTCATGGTGCAGTCAGCAAGGCCACCCTTCGACAACCAACTGCTTGTGGTGGTACAGTGTACTACGAGGGTCGATATGAGATTATATCTTTAGGAGGTTCTTTCAGTCCACATGAAGAGGGTGGTTGTAGAACAGGTGGTATGAGTATTGTTCTTGCGGGGACTGATGGAAAACTGGTGGGTGGTAGTGTTTCTGGAATGCTTGTTGCGGCATCAGAAGTACAGGTAATTGTGGGTAGTTTTATTATGAAAAAGTCAAGCTCAAAGGGGAAATCAGGGCTCTCTCCAGCAGCCATGCCCTCAGGATCTCAAGCGTTGAATTCTGGCGCTTCATCTATGACTAAACCCAATGCTACAACTGAAGCGGTGGTTTCAAGTAATTCCTCTGAGGAAAATGACGATAGCTTCTTGCAAAGGGGATCTGGATCTGGGTCTGGGTCTGGATCTGGAATCGGGTCTGAAACCGAGTCTGCAACTGGAACCGGGTCTGGACCTGGATTCTATAGGTTTGGCCAGCCCAGTCATAATATGCAATGGAATCAAATATGGCATCCGCAACGATGA 1194 0.5025 MDSWQPPQSSRPSRSQQQHSWAPPPNIMTPPGFPSAMLNPIASSLINLNSSSMLMSPATGRFPFPTFASHSRSTPPPAPLLPSPPSKPSEPLRTTTSPYEGSSALGPIDSPKKKRGRPKNSSPDGSTTLGLGSTPLSSSAPADLSPTSDEPPAKKRRGRPPGSAKKQRDDLGDGGTHFTPHVILVNTGEDIATKISSFGEEGSRVVFIFSAHGAVSKATLRQPTACGGTVYYEGRYEIISLGGSFSPHEEGGCRTGGMSIVLAGTDGKLVGGSVSGMLVAASEVQVIVGSFIMKKSSSKGKSGLSPAAMPSGSQALNSGASSMTKPNATTEAVVSSNSSEENDDSFLQRGSGSGSGSGSGIGSETESATGTGSGPGFYRFGQPSHNMQWNQIWHPQR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00506 397 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 82 342 IPR039605 GO:0003680
Accr9g00506 397 MobiDBLite consensus disorder prediction 383 397 - -
Accr9g00506 397 Gene3D - 180 304 - -
Accr9g00506 397 MobiDBLite consensus disorder prediction 296 372 - -
Accr9g00506 397 ProSiteProfiles PPC domain profile profile. 175 317 IPR005175 -
Accr9g00506 397 Pfam Plants and Prokaryotes Conserved (PCC) domain 180 291 IPR005175 -
Accr9g00506 397 MobiDBLite consensus disorder prediction 70 91 - -
Accr9g00506 397 CDD DUF296 179 291 IPR005175 -
Accr9g00506 397 MobiDBLite consensus disorder prediction 149 175 - -
Accr9g00506 397 MobiDBLite consensus disorder prediction 53 177 - -
Accr9g00506 397 SUPERFAMILY AF0104/ALDC/Ptd012-like 177 292 - -
Accr9g00506 397 MobiDBLite consensus disorder prediction 121 145 - -
Accr9g00506 397 MobiDBLite consensus disorder prediction 1 23 - -
Accr9g00506 397 MobiDBLite consensus disorder prediction 296 397 - -
Accr9g00506 397 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00506 Accr-Chr9 5725533 5729518 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00506 112 320 AT-hook Motif Nuclear Localized (AHL) Family AT5G46640 50.000 2.57e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00506 - - pcin:129322642 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00506 9 5725533 5729518 Accr10g00294 10 4965272 4970760 CCT