Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00504 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTGTTCCAAATCTTCACAGACCCGACTTGCACCTTCAGCACCAACCCGATTCCGAAGAAGATGCCAATCGGCCTGCCCAGTTTTCCTCCGAAGATGGGTCCCACCAAGGCCTCGAGCTCGCCTCCGCCTCCGCGGGCCAGGGCAACATCGTCGCCCGCCGTCCCCGCGGCCGCCCAGCCGGTTCAAAGAACAAGCCGAAACCGCCCGTCATCATTACCAGAGAAAGCGCCAACACTCTCCGGGCCCATATTCTAGAAGTGGCCAGTGGCTCCGATGTGTTTGACTCCGTCGCCACCTACGCGCGCCGCCGCCAGCGCGGGATCTGTATTCTGAGCGGCAGTGGTACCGTCACCAATGTGACGTTGCGGCAGCCGGCTGCCGCGGGAGCCGTGGTTACACTTCATGGAAGGTTCGAGATATTGTCTCTGTCGGGGTCGTTCCTGCCGCCGCCGGCCCCGCCAGGCGCGACGAGCCTGACGGTATACTTGGCAGGAGGGCAAGGACAAGTTGTGGGAGGATGTGTAGTGGGAGAGTTGACTGCAGCGGGACCCGTCATGGTGATCGCTTCTTCGTTTACAAACGTCGCGTACGAAAGGTTGCCGCTGGATGAGCAGGAGGAGCAACTCCAGATGCAACCACCCGCGGGGGCTTCTTCTCAAGGTTCTGCTGCAGCGGCGGCCGCGGCTTTCCCAGACCCATCCAACGGTCTACCTTTCTTCAATTTGCCCCTTAATATGCAGATTCCGGTGGAAGGCTGGGCCGGCAACTCAGCCCCTCGTCCTCCATTTTGA 825 0.6061 MAGLDLGTASRFVPNLHRPDLHLQHQPDSEEDANRPAQFSSEDGSHQGLELASASAGQGNIVARRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVASGSDVFDSVATYARRRQRGICILSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVYLAGGQGQVVGGCVVGELTAAGPVMVIASSFTNVAYERLPLDEQEEQLQMQPPAGASSQGSAAAAAAAFPDPSNGLPFFNLPLNMQIPVEGWAGNSAPRPPF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00504 274 Gene3D - 91 224 - -
Accr9g00504 274 MobiDBLite consensus disorder prediction 21 37 - -
Accr9g00504 274 FunFam AT-hook motif nuclear-localized protein 91 219 - -
Accr9g00504 274 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 205 IPR005175 -
Accr9g00504 274 ProSiteProfiles PPC domain profile profile. 88 225 IPR005175 -
Accr9g00504 274 MobiDBLite consensus disorder prediction 218 238 - -
Accr9g00504 274 MobiDBLite consensus disorder prediction 1 82 - -
Accr9g00504 274 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 220 - -
Accr9g00504 274 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 228 IPR014476 GO:0003680
Accr9g00504 274 MobiDBLite consensus disorder prediction 38 54 - -
Accr9g00504 274 CDD DUF296 92 175 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00504 Accr-Chr9 5713773 5714597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00504 1 274 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.436 9.99e-102 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00504 - - qsa:O6P43_024484 412.149