Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00503 ATGGCTCCTGCAGACAACATTGTCCTTGCGAACCCTCCAAATCACCCAAACCCTAATGCCTCTCCGATGTGGAACCCTGAAGAAGATGACTCTTGGGAAGTTAGAGCTTTTGCAGAAGATACACGAAACGTTATGGGCACCACTTGGCCTCCCAGGTCCTACACCTGCACTTTCTGTAGAAGAGAGTTCCGCTCCGCCCAAGCTCTCGGCGGTCACATGAACGTCCACCGCCGTGACCGGGCTCGCCTCCACCAAGTTCTCCCAAACTCTTCATCATTCATGATCCCACCACAAGACCTTGTTCCTAATAATGGATTGTGCCTTTTCTATCGTTTACCAGCCCCTAATAATTATAACCCCAACTTTTTCTCCGCCGGTAACGGCGCTAATCAGAATGTATGTGGAGAATCACCTTCCACACTTCTCTCCATCTCTCCTTTTCCGGCAAACAAGTTTGATTTTTCGGTGCTGCGGTCTGGCTGTAATATTTCGTCTTACTCTAATAAGTCTACCAAAGTGGAACTTCCCACCAACAACTCCTCCATTGATGGCCACGAAGAACTTGATCTTGAGCTCCGGCTAGGCCACAGGCCAACACCCACCTGA 606 0.4967 MAPADNIVLANPPNHPNPNASPMWNPEEDDSWEVRAFAEDTRNVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQVLPNSSSFMIPPQDLVPNNGLCLFYRLPAPNNYNPNFFSAGNGANQNVCGESPSTLLSISPFPANKFDFSVLRSGCNISSYSNKSTKVELPTNNSSIDGHEELDLELRLGHRPTPT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00503 201 SUPERFAMILY beta-beta-alpha zinc fingers 51 81 IPR036236 -
Accr9g00503 201 Gene3D Classic Zinc Finger 43 93 - -
Accr9g00503 201 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Accr9g00503 201 SMART c2h2final6 54 76 IPR013087 -
Accr9g00503 201 MobiDBLite consensus disorder prediction 1 28 - -
Accr9g00503 201 PANTHER OS07G0101800 PROTEIN 23 198 - -
Accr9g00503 201 Pfam C2H2-type zinc finger 54 78 - -
Accr9g00503 201 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00503 Accr-Chr9 5680559 5681164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00503 23 198 C2H2 Transcription Factor Family AT4G17810 40.291 4.58e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr9g00503 zf-C2H2_6 3.9e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00503 - - pcin:129284523 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00503 9 5680559 5681164 Accr9g00503 9 5680559 5681164 ECH