Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00498 ATGGAGATTTCATCAAAGTACTTCGCTGAGCTGGATCCGAGCATGTTCGAGCAGTACCCAGTGGATTATATGGCGTACGAGGTTAACAACTTTCAGGATTTGTCGGGATGCGGCGACAGTTACTCATCTTTCACCTCCAAAAGAAGCCGTGATGAGTGGTTCCCAGTGGAAAGTCCAGAATCTGTTGTCCAACAAAGAGCAACCAAGCAACTCAAGACCATCAACAACACTACTAGCTGGACATCTTGCACAACTACAATGGCTGATCCCATCGTCCCTTCCAACCTTTCAGCTTCTAACTCGTCCTCCCAGATTATTTCTTTTGAGAATTCTAATAATTCTTCCCCAGATGTGGCTTCTCACCAATTTCCCAGCTTGGACTCCAGTGCTGTTGTCAAGCCTAAAACCGAGACTGTTTTCTCTTCTGACGACTTGGATTTCAGTACTCCATTTTCCATTATTTCTCAGCCCACCTATGACCACAAGCCTGACTCCTTTTTGCTCCCACGTGTAAAGGAAACTGCCACCATTTCTAGAAATCCAATTCTAGCTCAAGATCACGTTATGGCCGAAAGAAAACGTAGGGAGAAGCTCAGCCAGCGGTTCATTGCTCTTTCCGCCATTCTTCCTGGTCTCAAAAAGATGGATAAGGCCTCAGTCCTAGGAGATGCCATCAACTATGTGAAACAACTGGAGGGGCGCGTGAAGACTCTGGAGGAACAGTTAGCCAAGAAAGCAGTGGAAACCGCAGTGTTTGTTAACAGATCTGTTCTTTATGCCGACGATAACGGCTCCTCCTCCGATGAAAATTCCAACAGCGTGTCCGACCAGTCGCTGCCCGAGATCGAAGCAAGAGTTTCCGCCAAGGACGTCCTCATCAGAATCCACTGCGACAAACAAAACGGATGTTGCGCCACCATACTATCCCGGCTACAACATCTCAACCTCACTGTCCAGAGTAGCAGCTTCTTGCCCTTCGGGGATACCTCCCTTGATATTACTATTGTTGCTCAGATCAACAAGGAAGAGAGCGTGACAGCAAAAGATATAGTAAGAAGCCTAAGGCAGGGTCTGGGGCAATTAATTTGA 1089 0.472 MEISSKYFAELDPSMFEQYPVDYMAYEVNNFQDLSGCGDSYSSFTSKRSRDEWFPVESPESVVQQRATKQLKTINNTTSWTSCTTTMADPIVPSNLSASNSSSQIISFENSNNSSPDVASHQFPSLDSSAVVKPKTETVFSSDDLDFSTPFSIISQPTYDHKPDSFLLPRVKETATISRNPILAQDHVMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAINYVKQLEGRVKTLEEQLAKKAVETAVFVNRSVLYADDNGSSSDENSNSVSDQSLPEIEARVSAKDVLIRIHCDKQNGCCATILSRLQHLNLTVQSSSFLPFGDTSLDITIVAQINKEESVTAKDIVRSLRQGLGQLI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00498 362 PANTHER BHLH TRANSCRIPTION FACTOR 53 358 - -
Accr9g00498 362 Coils Coil 221 248 - -
Accr9g00498 362 Pfam Helix-loop-helix DNA-binding domain 186 232 IPR011598 GO:0046983
Accr9g00498 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 182 231 IPR011598 GO:0046983
Accr9g00498 362 Gene3D - 176 246 IPR036638 GO:0046983
Accr9g00498 362 SMART finulus 188 237 IPR011598 GO:0046983
Accr9g00498 362 CDD bHLH_AtNAI1_like 183 256 - -
Accr9g00498 362 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 249 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00498 Accr-Chr9 5625932 5627613 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00498 100 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.803 5.73e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr9g00498 HLH 2.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00498 - - fve:101302494 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00498 9 5625932 5627613 Accr10g00285 10 4831218 4833008 CCT