Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00497 ATGGAGGACCCAAGCATTTTCGAGCAGTACCCAGTGGATTGTTTGGCGTACGAGGTTGATGACTTTCAGGATTTGTCGGGATGCGGCGACAGTTACTCATCTTTGAGCTCCAAAAGAAGCCGCGATGAGTGGTTCCCAGTGGAGAGACCAGAATCTGTGGCCCAACAAAGGGCAAACAAACAACTCAGAAGCATCAACAATACTACTAGCTGGACTTCTAGCACCACTTCAATGGCTGATCCCATCGTCCCTTCCAATTATTCTGCTTCTAAGTCTTCCTCCCAGATCATTTCGTTTGATAATTCTAATAATAATTCTTCCCCAGATGTCGCTTCAAACCAATTTTACAGCTTGGATTCTAGTACTGTTGTCAAGCCTAAAACCGAGACTGTTTTCTCCCCTGACAACTTGGATTTCAGCGCCCCGTTCTCCATTATTTCTCAACCCACCTATGACCTCAAACCTGATTCCTTTCAGCTCCAACATGAGAAAAAAACTGCCACCATTGCCAGAAATCCAATTCAAGCTCAAGATCACGTCATGGCCGAAAGAAAACGTAGGGAGAAACTCAGCCAGCGGTTTATTGCTCTTTCCGCCATTCTTCCTGGCCTCAAAAAGATGGATAAGGCTTCAGTCCTAGGAGATGCTATCAACTATGTGAAACAATTGCAGGAGCGAGTGACAACTCTGGAGGAACAGGTAAACAAGAAAGCAGTGGAAACAGCCGTGTTTGTGAAAAGATCTGTTCTATATGCCGAGGACGATGGCTCATCCTCCGATGAAAATCCCAACAGCCGCTCCGACCAGCCACTGCCGGAGATCGAAGCAAGAGTATCAGGCAAGGATGTCCTCATCAGAATCCACTGCAACAAACAGAATGGATGTTGTGCCACCATACTCTCCCAATTACAACATCTCAATCTCACTGTTCAGAGTAGCAGCTTCTTGCCCTTTGGCAATACTACTGTTGATATTACTATTGTTGCCAAGATGAACAATGAAGAGTGCGTGACTGCGAAGGATATAGTAAGAAGCCTAAGGCAGGGTCTGATCAGGCACTTAAATTGA 1068 0.4569 MEDPSIFEQYPVDCLAYEVDDFQDLSGCGDSYSSLSSKRSRDEWFPVERPESVAQQRANKQLRSINNTTSWTSSTTSMADPIVPSNYSASKSSSQIISFDNSNNNSSPDVASNQFYSLDSSTVVKPKTETVFSPDNLDFSAPFSIISQPTYDLKPDSFQLQHEKKTATIARNPIQAQDHVMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAINYVKQLQERVTTLEEQVNKKAVETAVFVKRSVLYAEDDGSSSDENPNSRSDQPLPEIEARVSGKDVLIRIHCNKQNGCCATILSQLQHLNLTVQSSSFLPFGNTTVDITIVAKMNNEECVTAKDIVRSLRQGLIRHLN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00497 355 Coils Coil 213 240 - -
Accr9g00497 355 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 223 IPR011598 GO:0046983
Accr9g00497 355 CDD bHLH_AtNAI1_like 176 248 - -
Accr9g00497 355 PANTHER BHLH TRANSCRIPTION FACTOR 61 352 - -
Accr9g00497 355 Pfam Helix-loop-helix DNA-binding domain 177 224 IPR011598 GO:0046983
Accr9g00497 355 Gene3D - 166 238 IPR036638 GO:0046983
Accr9g00497 355 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 242 IPR036638 GO:0046983
Accr9g00497 355 SMART finulus 180 229 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00497 Accr-Chr9 5606072 5607333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00497 92 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.077 7.06e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr9g00497 HLH 5.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00497 - - gmx:100798011 295.819