Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00482 ATGGGGAGGGCTCCTTGCTGTGACAAAGCCAACGTGAAGAGAGGCCCTTGGTCCCCTGAGGAAGACGCCAAGCTCAAGGCATATATTGAGCAGCTCGGCACCGGCGGCAACTGGATTGCCTTGCCCCAAAAGATAGGCCTTAAGAGATGTGGGAAAAGCTGTCGCCTAAGATGGTTGAATTATCTTCGGCCAAACATAAAGCATGGGGGTTTCTCGGAGGAAGAAGACAACATAATCTGCAGCCTCTATGCCACTATTGGAAGCAGGTGGTCAATAATAGCATCACAATTACCGGGGAGAACGGACAATGATATAAAGAACTACTGGAACACCAGGTTGAGGAAGAAGCTTCTGGGTAAAAACCGCAAGGAACAACAGGCCCTTGCTCGCCCAAAGCCACTCATGATGAAGAACCAAACTGAACATTTGGTGACACCTGTGACCCAAAATCCCACCTGGCCTGCCCAACAATATCATCATGATCCCAACCATGGAAATTTGCCAAATAAAGTAGAACACCACCAACCATACTCACACACACTTTCATCCCATACCATAAATTCCGACTACCAACTTCTCCAACTAGAACAGCAGCCATACTCGGCCTCAATTAATTCAGTAACAGCACCGCCAGTGAATAATAGTAGTAGTAGCAGCTGTGATCAATCGTCGTCCAACATTTTCGACGGCTTTGAAAGCTTTGTCGATGATTATTGGAGTGAGTTGGTTAGTATGAGGCCACAGCAACAATTAGATGCTACGTTGCAGGGTTACTGTGGAATGGGCACCAGCGGTGCAGCTTCAACAGAAAGCACTAGCTGGGGTGATATTACCTCTCACCTTCAGCTTTACTCTCCTCTGGTTTCGCCATACCAAGTTGTCCAACAAGGAATGCCTCATGATATCGCTTGTTTTGAGGAGTACTCTACGAACTTTGGAGTGCAATAG 948 0.4726 MGRAPCCDKANVKRGPWSPEEDAKLKAYIEQLGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYATIGSRWSIIASQLPGRTDNDIKNYWNTRLRKKLLGKNRKEQQALARPKPLMMKNQTEHLVTPVTQNPTWPAQQYHHDPNHGNLPNKVEHHQPYSHTLSSHTINSDYQLLQLEQQPYSASINSVTAPPVNNSSSSSCDQSSSNIFDGFESFVDDYWSELVSMRPQQQLDATLQGYCGMGTSGAASTESTSWGDITSHLQLYSPLVSPYQVVQQGMPHDIACFEEYSTNFGVQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00482 315 SMART sant 13 64 IPR001005 -
Accr9g00482 315 SMART sant 67 115 IPR001005 -
Accr9g00482 315 CDD SANT 71 113 IPR001005 -
Accr9g00482 315 FunFam Transcription factor RAX3 7 68 - -
Accr9g00482 315 Gene3D - 7 68 - -
Accr9g00482 315 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Accr9g00482 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Accr9g00482 315 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Accr9g00482 315 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Accr9g00482 315 PANTHER OS09G0431300 PROTEIN 1 227 - -
Accr9g00482 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Accr9g00482 315 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Accr9g00482 315 CDD SANT 16 62 IPR001005 -
Accr9g00482 315 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Accr9g00482 315 Gene3D - 70 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00482 Accr-Chr9 5454271 5455467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00482 1 137 MYB Transcription Factor Family AT5G65790 85.507 2.04e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr9g00482 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00482 K09422 - gmx:100812816 317.005