Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00479 ATGAAGACCGCGGAGAATGATGAAAACAACTGGCTGGGTTTCTCTCTCTCCCCCCACATGAATCTAGATGTTCCTTCTGACTGTAATGACCAACAACAACAACAGGACACACCAGTGACACGGCCTTCCTCTGCCGCTGCAGATACAGTTCCGGCAAGCTTTTATCACTCCATGCCCCTTCCTCCTAATTATGGCATTTACTATGGTGGTGGCCTTGAAGCTGAAAATGTCGGCTTCTATTCTTCCCTTCCTGTCATGCCCCTGAAATCTGACGGTTCTCTCTATCTAATGCACTCACAACCTCAAGCAATGGTATCGACTTCAGCCCCAAAACTGGAGAATTTCTTAGGCAGCTCAGCAATGGGGACCTTGAGCTTAGACAGCATGATTTTTGCCAACCAATCCTCACGCCGAGAACTCAACAACACAAACTATCTAAACAACGGTGTAGAACAGGGGCAGGACATTCAGGCTCAGCCTTTCGCATCATGCTATTCTGGCTTCAGAAGTCATGAAATGATGTTAGAAGGGGCCAAACAAAATGACGTTTCAGAGTGTAACGTCCAAGTCCCAAGTATTGCAGAGGAGGGAGTTTCTGGAATGAGGAGCTGGGGCATAAGAATCAACCAAGCTGGCCATGCACCGGAGTCGGAGATGATGGTAAGCGTTGAGGATAACAGTGGCGGCGAATCTGGGTCCATTGGATCAATGGCGTATGGCGATTTGCAGTCACTGAGCTTGTCCATGAGCTCTGGCTCACAGTCAAGCTGTGTCACAAGTTCACAGAGAGCTTCACCTTCTGTCATTGACTCTGTTGGGGTGGATACAAAGAAAAGAGGACCTGAAAAGTTTGACCAGAAGCAAATTATCCACCGGAAATCCATAGATACCTTTGGCCAAAGAACCTCCCAATATAGAGGTGTAACTAGACATAGATGGACTGGTAGATACGAAGCACATCTTTGGGACAACAGTTGCAAGAAAGAAGGTCAAAGCAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATTTGGAAGAAAAAGCTGCGAAATCTTATGATCTGGCCGCACTCAAGTATTGGGGACCCTCCACTCATATCAATTTCCCATTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACCAGACAGGAATACGTTGCTCATTTGCGGAGGAAAAGCAGCGGATTTTCTAGAGGTGCTTCCATGTACAGAGGAGTGACAAGACATCATCAACATGGGCGGTGGCAAGCTCGAATCGGTAGAGTGGCTGGAAACAAGGATCTATATCTTGGAACATTCAGCACCCAAGAGGAAGCAGCTGAGGCATATGACATAGCAGCTATAAAGTTCCGTGGAGTAAACGCGGTGACCAACTTTGACATAACAAGGTATGATGTGGACAAAATCATGGCCAGCAGTAACCTTCTTAGCGGTGAACTAGCCAGGCGAAACAGAGAGATCGATGCCGGTAACGATCGGGCCATTATTCCTATAGGTTCTGCATATGTTGAAAACCAACAGGATGCGATTTCAATGCGCCAGAGCTTCGACGGCCCACATATCTTAGATCGTTCTCAATGGATTACAGAAGTTGGCCAAAATCCAGCAGCAAGAATTGAGACTTATAGAACCCAGTCCTACTCAATGCCTTCTTTAGATTACTTGATCCATCAAGTAGATGACTCAACCAAGATGGGAACACACGTCTCTAATCCTTCGTCATTAGTAACAAGTTTGAGCAGCTCGCGAGAAGTTAGTCCTGATAAAACAAGCCTGCCAGTTCTCACTGAAACTCCTTCGTTAGTGACAAGTTTGAGGCCTCCACTTTCATTGCCTCATGTGCCAGTTTTTGCTGCTTGGACAGATGCTTGA 1884 0.4618 MKTAENDENNWLGFSLSPHMNLDVPSDCNDQQQQQDTPVTRPSSAAADTVPASFYHSMPLPPNYGIYYGGGLEAENVGFYSSLPVMPLKSDGSLYLMHSQPQAMVSTSAPKLENFLGSSAMGTLSLDSMIFANQSSRRELNNTNYLNNGVEQGQDIQAQPFASCYSGFRSHEMMLEGAKQNDVSECNVQVPSIAEEGVSGMRSWGIRINQAGHAPESEMMVSVEDNSGGESGSIGSMAYGDLQSLSLSMSSGSQSSCVTSSQRASPSVIDSVGVDTKKRGPEKFDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDLEEKAAKSYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVDKIMASSNLLSGELARRNREIDAGNDRAIIPIGSAYVENQQDAISMRQSFDGPHILDRSQWITEVGQNPAARIETYRTQSYSMPSLDYLIHQVDDSTKMGTHVSNPSSLVTSLSSSREVSPDKTSLPVLTETPSLVTSLRPPLSLPHVPVFAAWTDA 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00479 627 CDD AP2 405 466 IPR001471 GO:0003700|GO:0006355
Accr9g00479 627 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 106 492 - -
Accr9g00479 627 SMART rav1_2 406 470 IPR001471 GO:0003700|GO:0006355
Accr9g00479 627 SMART rav1_2 304 376 IPR001471 GO:0003700|GO:0006355
Accr9g00479 627 MobiDBLite consensus disorder prediction 22 46 - -
Accr9g00479 627 SUPERFAMILY DNA-binding domain 303 372 IPR016177 GO:0003677
Accr9g00479 627 Coils Coil 371 391 - -
Accr9g00479 627 PRINTS Ethylene responsive element binding protein signature 446 466 IPR001471 GO:0003700|GO:0006355
Accr9g00479 627 PRINTS Ethylene responsive element binding protein signature 305 316 IPR001471 GO:0003700|GO:0006355
Accr9g00479 627 SUPERFAMILY DNA-binding domain 405 465 IPR016177 GO:0003677
Accr9g00479 627 FunFam AP2-like ethylene-responsive transcription factor ANT 303 372 - -
Accr9g00479 627 CDD AP2 303 370 IPR001471 GO:0003700|GO:0006355
Accr9g00479 627 ProSiteProfiles AP2/ERF domain profile. 304 370 IPR001471 GO:0003700|GO:0006355
Accr9g00479 627 FunFam AP2-like ethylene-responsive transcription factor 405 466 - -
Accr9g00479 627 MobiDBLite consensus disorder prediction 570 596 - -
Accr9g00479 627 ProSiteProfiles AP2/ERF domain profile. 406 464 IPR001471 GO:0003700|GO:0006355
Accr9g00479 627 Gene3D AP2/ERF domain 406 466 IPR036955 GO:0003700|GO:0006355
Accr9g00479 627 Gene3D AP2/ERF domain 303 372 IPR036955 GO:0003700|GO:0006355
Accr9g00479 627 Pfam AP2 domain 407 456 IPR001471 GO:0003700|GO:0006355
Accr9g00479 627 Pfam AP2 domain 304 362 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00479 Accr-Chr9 5406008 5409215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00479 63 627 AP2-EREBP Transcription Factor Family AT4G37750 46.382 3.20e-153 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr9g00479 AP2 3.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00479 K09285 - gmx:100792451 735.717