Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00449 ATGGATACATTGTTTAGGCTAGTCAATTTTCAACAACCTGATCAATCCCTCAACTCCACCACCAGCCTCACTTCTAGCGGCTCCAAATCTTCCACACCCCAAAACTTCTACTCCCCATCACAACATCAACAACAACACCAAGAATGCTTCAACCTTTTCATGGATAATGAAGAAGACTTGTCCTCGTCTTCTTCCAAGAACTACTATAATCCCTGTCACCCCCATCACCACCCTACTTCCTCCACCCCCACCCCCACCCCCACCCCCACCGCCGATTTCTCCTTCTCCCCCACCACTGCTGACTTCAACTTGGAACTTTCCGGCAACGACAAGTGGGCCTCCGATCTCCTCCTCGAAACAGCTCGCGCCATCGCCGACAAAAACAGCCCTCGTATCCAACAACTCATGTGGATGCTCAATGAACTGGCTTCCCCTTATGGTGACACTCATCAAAAACTCGCCTTTTACTTCCTCCAGGCCTTGTTCGCTCGCATGACTGACTCTGGCCTCCGTACGTACCGTACCTTAACCACAGCGTCTGACAAAAACTGCTCTTTTGAATCAACCAGAAAAACCGTCTTGAAGTTCCAAGAGGTAAGCCCTTGGACTACCTTCGGTCACGTCGCTTCCAATGGAGCCATATTAGAAGCCCTCGAATCAGAGCCTAAATTACACATACTCGATTTCAGCAACACATATTGCACCCAATGGCCTACCTTTTTAGAGTCCCTAGCCACTCGCGCTGACGATGCCCCTCACCTCCGTTTAACCACCGTCCTCACCACCCGACCCGGGGCTTCCGACGCGGCAGTTCAAAAAGTCATGAAGGAAATAGGTGCTAGGATGGAAAAATTCGCGCGTCTCATGGGTGTGCCATTCAAATTCAACGTCATCCATCATAACGGTGATCTTTCAGAGTTGAAATTTGCGGAATTAGATATCAAAGATGACGAGGCTTTAGCTGTAAACTGTGTGAACACTTTGCATTCTGTCTCGGTCGTTGGTAATAACAGTAATACTCATCGTGACGCGTTGATATCTTCGTTTAGGAGGTTACAGCCTAGGATAGTTACGATAGTGGAAGAAGAAGCTGATCTTGATGTTGGGTATGATGGTTTTGAATTTGTGAATGGATTTGAAGAATGCTTGAGGTGGTTTAGGGTTTATTTTGAGGCGTTGGAGGAGAGTTTTCCGAAGACGAGTAACGAAAGGCTTATTCTTGAGAGGGAGGCCGGACGATCGGTGGTTGACTTGGTGGCGTGTGATCCGTCGGTGTCGATGGAGCGGCGGGAGAGGGCGGGACGGTGGTCGCAGCGTATGCATGGGGTTGGGTTTAATGCGGCGTCGTTCAGTGACGAGGTATGTGATGACGTGAGGGCACTGCTGAGAAGATACAGGGAGGGGTGGTCAATGACACAGTGTTCCTCACACGCCGGAATATTCTTGTCGTGGAAGGAGCAGCCGGTGGTGTGGGCCAGTGCCTGGAGGCCTTGA 1494 0.5007 MDTLFRLVNFQQPDQSLNSTTSLTSSGSKSSTPQNFYSPSQHQQQHQECFNLFMDNEEDLSSSSSKNYYNPCHPHHHPTSSTPTPTPTPTADFSFSPTTADFNLELSGNDKWASDLLLETARAIADKNSPRIQQLMWMLNELASPYGDTHQKLAFYFLQALFARMTDSGLRTYRTLTTASDKNCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALESEPKLHILDFSNTYCTQWPTFLESLATRADDAPHLRLTTVLTTRPGASDAAVQKVMKEIGARMEKFARLMGVPFKFNVIHHNGDLSELKFAELDIKDDEALAVNCVNTLHSVSVVGNNSNTHRDALISSFRRLQPRIVTIVEEEADLDVGYDGFEFVNGFEECLRWFRVYFEALEESFPKTSNERLILEREAGRSVVDLVACDPSVSMERRERAGRWSQRMHGVGFNAASFSDEVCDDVRALLRRYREGWSMTQCSSHAGIFLSWKEQPVVWASAWRP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00449 497 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 92 486 IPR005202 -
Accr9g00449 497 ProSiteProfiles GRAS family profile. 104 496 IPR005202 -
Accr9g00449 497 MobiDBLite consensus disorder prediction 61 77 - -
Accr9g00449 497 Pfam GRAS domain family 115 496 IPR005202 -
Accr9g00449 497 MobiDBLite consensus disorder prediction 16 42 - -
Accr9g00449 497 MobiDBLite consensus disorder prediction 61 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00449 Accr-Chr9 4895878 4897371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00449 1 497 GRAS Transcription Factor Family AT4G37650 57.013 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr9g00449 GRAS 2e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00449 - - qsa:O6P43_033912 689.108