Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00447 ATGGGGAAGAAGCAGCATAGCAAGGATCGGATGTTTATCACTAAAACAGAGTGGGCGACGGAATGGGGAGGAGCCAAATCCAAAGAAAATCGTACCCCTTTTAAACGACTTCCTTTCTATTGCTGCGCGCTTACATTTACGCCGTTTGAGTATCCGGTGTGCACAGCTGATGGGAGTGTTTTTGATGTTATGAATATTACCCCGTATATGATCAAATATGGAAAGCATCCCGTCACCGGAGCTCCGCTTAAGCAGGACGACCTCATTCCACTAACTTTCCACAAGAATTCAGATGGGGAATATCAGTGCCCTGTGCTAAACAAAGTTTTCACTGAATTCACACATATTGTAGCAGTAAAGACCACAGGAAATGTTTTCTGCTATGAGGCCATTAAAGAATTAAACATTAAAACCAAAAACTGGAAGGAGCTCCTGACTGACGAGCCATTCACTAAGGATGACCTCATAACTATTCAGAATCCTAATGCACTTGACAGCAAGGTTCTTCTGGATTTTGACCACATTAAAAATAATTTGAAAGTTGATGATGAAGAACTAAACAAAATGGGTTCAGATCCAACCTATAATATAAATGTGTCTGGAGATATCAAACAAATGCTTCAGGAGCTTGGAACTGAGAGAGCAAAGGAAACTGCCATGCTTGGGGGAGGTGGGAGCAAGGCACAAAAGGAAAGGGCTGCTGCACTTACTGCCATATTAGCTGCAAGGTCACGTCTGAAGGAGGATTCCAAGTCAAATGGTGATGCTGAAGCTCCTCAGGGATTTAGTATAGTAGATGCTGCTTCTGCCTCAGTGCATGGAAGAAGCGCGGCTGCTGCTAAAGCCTCATCAAGTGATAAAACTGCTGCCAGGATTGCTATGCACTTGGCTGGTGAGAGGGCTCCATTAAATGGGAAGCTGGTAAAAAGCCGATTCACGACTGGCGCTGCTTCACGATCCTTTACTTCGACATCTTTTGATCCAGTAACAAAAAATGAATATGAATATGTAAAAGTGGAGAAAAATCCAAAGAAGAAAGGATATGTGCAACTGCATACGACTCATGGTGATTTGAACATTGAGCTGCACTGTGATATAGCACCCAGGACATGTGAGAACTTTATCACACTTTGTGAGCGTGGATATTATAATGGGGTTGCATTTCATAGGAATATAAGGAATTTCATGATACAAGGCGGTGATCCTACTGGGACTGGGAGAGGAGGTGAATCAATATGGGGGAAACCATTTAAAGATGAAGTTAACTCCAAATTACTTCATTCTGGTAGGGGTGTCGTTAGCATGGCAAATAGTGGTCCACACACCAATGGCTCCCAGTTTTTCATCCTGTACAAATCTGCAAATCATTTAAACTATAAACACACAGTTTTTGGTGGAGTGGTTGGTGGCTTGACAGCATTGGCGGTCATGGAAAAGGTTCCTGTTGATGACGATGACCGACCTCTGGAGGAAATCAAGATAACTAGTGTCACAGTTTTTGTCAATCCCTACACAGAACTGGATGAGGAAGACCAGGAGAAGGCTGATGAGAAGAATGTGGAGGATGAAGATAAGGATAAGGTTGGGTCATGGTATAGTAATCCTGGTGCTGGAACATCTGAATCTGGAGGAGGAGGTGGTGGTGGTGTTGGTGTTGGCAAGTACTTGAAAGCCAGGAATGGTCAAGATTCTGCTACTGCTAACAATGGCACATCAGTTGTAGGAAAGAAAAGAAAAGTGGGAGTGGCCAGTGGTGAATTTAAAGATTTTTCAGCATGGTGA 1782 0.4327 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKRLPFYCCALTFTPFEYPVCTADGSVFDVMNITPYMIKYGKHPVTGAPLKQDDLIPLTFHKNSDGEYQCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNIKTKNWKELLTDEPFTKDDLITIQNPNALDSKVLLDFDHIKNNLKVDDEELNKMGSDPTYNINVSGDIKQMLQELGTERAKETAMLGGGGSKAQKERAAALTAILAARSRLKEDSKSNGDAEAPQGFSIVDAASASVHGRSAAAAKASSSDKTAARIAMHLAGERAPLNGKLVKSRFTTGAASRSFTSTSFDPVTKNEYEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDIAPRTCENFITLCERGYYNGVAFHRNIRNFMIQGGDPTGTGRGGESIWGKPFKDEVNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNYKHTVFGGVVGGLTALAVMEKVPVDDDDRPLEEIKITSVTVFVNPYTELDEEDQEKADEKNVEDEDKDKVGSWYSNPGAGTSESGGGGGGGVGVGKYLKARNGQDSATANNGTSVVGKKRKVGVASGEFKDFSAW 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00447 593 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
Accr9g00447 593 SUPERFAMILY RING/U-box 37 104 - -
Accr9g00447 593 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 383 400 IPR020892 GO:0003755|GO:0006457
Accr9g00447 593 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 342 513 IPR044666 -
Accr9g00447 593 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 348 499 IPR002130 GO:0000413|GO:0003755
Accr9g00447 593 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Accr9g00447 593 SUPERFAMILY Cyclophilin-like 348 507 IPR029000 -
Accr9g00447 593 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Accr9g00447 593 MobiDBLite consensus disorder prediction 505 555 - -
Accr9g00447 593 CDD cyclophilin_RING 348 506 - -
Accr9g00447 593 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 329 513 - -
Accr9g00447 593 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
Accr9g00447 593 Gene3D - 329 513 IPR029000 -
Accr9g00447 593 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 352 499 IPR002130 GO:0000413|GO:0003755
Accr9g00447 593 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Accr9g00447 593 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 446 458 IPR002130 GO:0000413|GO:0003755
Accr9g00447 593 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 459 474 IPR002130 GO:0000413|GO:0003755
Accr9g00447 593 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 388 400 IPR002130 GO:0000413|GO:0003755
Accr9g00447 593 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 431 446 IPR002130 GO:0000413|GO:0003755
Accr9g00447 593 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 362 377 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00447 Accr-Chr9 4889045 4892757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00447 1 593 U-box Gene Family AT5G67530 75.415 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00447 K10598 - gmx:100819923 1003.05