LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr9g00441	ATGGCTCGTTCTTCACCCATGGACAAGCATACATTGGTGAAACACCTCCGTACGACATTTGGGGAAGTCGTAGCTGTGACTGGTGATGGAACAAATGATGCACCAGCCCTTCATGAAGCTGACATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGACGTCATCATTATGGATGATAATTTTTCCACAATCGTGACAGTGGCAAAATGGGGACGTTCAGTTTACATAAACATTCAGAAATTTGTACAATTCCAGCTAATTGTTAATGTGGTTGCATTTTTTTGCTCAAATAATGTGGTTGCGTTACTAGTGAACTTCGCTTCAGCTTGCTGGACAGGAAGTACGCCCCTTACAGCTGTTCAACTACTGTGGGTGAACATGATAATGGACACACTGGGAGCCCCTGGCACTTGCAACTGA	438	0.4452	MARSSPMDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIMDDNFSTIVTVAKWGRSVYINIQKFVQFQLIVNVVAFFCSNNVVALLVNFASACWTGSTPLTAVQLLWVNMIMDTLGAPGTCN	145

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr9g00441	145	PRINTS	P-type cation-transporting ATPase superfamily signature	51	63	-	-
	Accr9g00441	145	PRINTS	P-type cation-transporting ATPase superfamily signature	27	46	-	-
	Accr9g00441	145	Pfam	haloacid dehalogenase-like hydrolase	11	67	-	-
	Accr9g00441	145	Gene3D	-	1	72	IPR023214	-
	Accr9g00441	145	PANTHER	CATION TRANSPORTING ATPASE	1	140	-	-
	Accr9g00441	145	Gene3D	-	73	140	-	-
	Accr9g00441	145	SUPERFAMILY	HAD-like	2	139	IPR036412	-
	Accr9g00441	145	NCBIfam	HAD-IC family P-type ATPase	1	108	IPR001757	GO:0005215\|GO:0005524\|GO:0016020\|GO:0016887
	Accr9g00441	145	PRINTS	H+-transporting ATPase (proton pump) signature	59	84	IPR001757	GO:0005215\|GO:0005524\|GO:0016020\|GO:0016887
	Accr9g00441	145	PRINTS	H+-transporting ATPase (proton pump) signature	27	43	IPR001757	GO:0005215\|GO:0005524\|GO:0016020\|GO:0016887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr9g00441	Accr-Chr9	4862333	4863020	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr9g00441	1	140	Primary Pumps ATPases	AT4G37640	87.857	3.12e-76	242

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr9g00441	K01537		-	atri:130821659	241.891