LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr9g00435	ATGAAAGCTCATCATTTGAGCTTCTTTTTTATCATATTATTGTCACCATACCTCGTCGTCCCCGCTCCAAAAGGGGTCACTGTCAGTGAAACTCAGTCAAGAAGAATTCTGCACCAGCCATTGTTTCCGGCGACTTCTGCTCCACCGCCAGGCACCGACTTGCCTCCACCACCGCCACCGTACACTAGTCCACCTTCTCCCATTCCCTTCTTTCATGAAGATCCCGCGGGGCCACTTCCAAATCAGAATCAGCCACCACCTTCGATTCCCCATGCCACAATTGCGAATCCAACAGCAACACAACCAACCAAACCAACAAAGAAGGTCGCAATTGCAATCTCCGTCGGAATTGTCACACTTGGCATGCTCTCGGCTCTTGCCTTCTTCTTGTACAGGCATCGGGTGAAGCAACCAATCGAGAGGCAGAAGCTCGTCGGTGGGAATTCTCAGAGGATTGCTGACGATCCAAGGATGCCACCATCGAGCTTTCTCTACATTGGGACCGTGGAACCAAGCCGAACGTCAGTGACCGACGCGAGTGAGACCAATGGAGCAAACAGGTCTCCTTATCACAAGCTCAATTCTATTAAGCAATCCGAAAGATACCGTCCCAGTCCTGAATTGCAGCCATTGCCGATGCTGAGTAAACCTCCAGATGGGAATTACCCACCGGTGTTGTCTTCATCATCCTCCGACGACGAGGAAAGCCCCAAGACGGTGTTTCATTCTCCACAGGGGTCATCATTGAGTTACGAGGATAGCTATTACACCCCAATTTCGCGTCATAGTTCTCTGGTTAATGGTGGCCAGCCGGCTTCTGTCAGGAGCGAGACCTATTCTGCTACTTCAATTCCCTATTCAAAGAGAACTTCACCGAAATCTCGGCTCACGGCTTCATCGCCGGATATTAGGCAAGTCATGATCCCACCAATTAAGCAGGCTCCGCCTGTGACGGCACCTGCTCCGCCCCCGCCGGCACCGCCACTTTCACAGTCGTGTCAGAATCTAGACAAAGAAGTGACTAACGGTCATTCTAGAAGACCGAAATTCTCAGCACCTCCGCCAGCGCCTCATTTGGCCCGTATTCAGTCAACTAGCGACACACCCCAAAACATATCTAGGACTTCCCTCCATCCTACTCCTCCTCCTCCTCCTCCGCCACCGCCACCACCTCCACCGCGGCAGTTGACGCCACGGAAAGCAGGGTCAGCAGCAATCAGCGTTTCCTCATCCTCTGCAACAAGGAACCAGCAATCTTGCTCTCCCAAACATGGAGCCGGTTCTGCGAATAGTGTAACAAAATCTTCAGACGATGGTGACAAAAGTCTCAGCTCTTCTTGGAGGCTTGAAGCCGATGACACGGAAGGAGCAAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTACGGGCGACTTCAGACCGCGCTACAGTGTGGGACCAACTAAAATCGAGCTCATTTCAATTAAATGAGGACATGATGGAAACCTTGTTTGGCTGCAATTCCAAGAACCCCGTCCCTACAGAGCCCATTCGAAGATCAGTTCTTCCACCTGTAGAACGGGAGAACAGAGTGTTAGACCCAAAGAAGTCTCAAAACATAGCTATACTACTAAGGGCACTGAATGTGACAAGAGATGAGGTGTCTGACGCACTTCTAGATGGCAATCCTGAAGCGTTGGGTGCAGAACTTTTGGAAACTTTAGTAAAAATGGCTCCCACTAAGGAGGAAGAAATAAAACTAAAGAACTATGATGGTGACCTCTCAAAACTAGGGTCAGCTGAAAGATTTCTTAAACAAGTTCTTGATATCCCTTTTGCTTTTAAAAGAGTTGAAGCCATGCTATACAGGGCCAACTTTGATGCAGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTCGAGGTAGCAAGTGAGGAATTGAAAAATAGCCGGTTGTTCCTTAAACTCCTTGAAGCCGTTCTCAGGACAGGAAACCGAATGAATGTGGGCACCAATAGAGGTGATGCTAAAGCTTTTAAGCTGGATACACTCTTAAAACTTGTAGACATAAAGGGAACAGATGGGAAGACTACATTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAAATGGTGATTCTGCAAATGGAAATTTTCAGAACCAAGTGAATACCAAATTTAGTGAGGACGACTTTAAGAAGCAGGGATTGCAGGTTGTGGCTGGGCTCAGTAGGGACCTCGGCAATGTCAAAAAAGCAGCAGGAATGGATTCTGATGTCTTAAGCAGCTATGTCTCAAAACTTGAAAAGGGTCTTGATAAAGTGAAAGTGGCTTTTCAACATGAGAAGCCAGATACGCAAGGGAATTTCTTCCACTCCACGAAGCTATTTCTAAAAAATGCTGAAGAGGAAATAGTTAGAATAAAGGCTGATGAACGAAAGGCCTTATTTCTTGTGAAAGAAGTTACAGAATACTTTCATGGGAATGCATCCAAGGAAGAAGCCCACCCTCTCAGAATCTTTATGATTGTTAGGGATTTCCTAAATATATTGGACCAGGTATGCAAAGAAGTGGGAATTATGCAGCAGGAAAGAAACGTGATTGGTTCTTCCAGATCCTTCCGGATAGCTGCTAGTGCATCATTACCAGTTCTAAACAGGTACAATGCGAGACAAGATAGAAGTTCAGATGAAGAAAGCTCGTCACCCTAG	2703	0.471	MKAHHLSFFFIILLSPYLVVPAPKGVTVSETQSRRILHQPLFPATSAPPPGTDLPPPPPPYTSPPSPIPFFHEDPAGPLPNQNQPPPSIPHATIANPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYRHRVKQPIERQKLVGGNSQRIADDPRMPPSSFLYIGTVEPSRTSVTDASETNGANRSPYHKLNSIKQSERYRPSPELQPLPMLSKPPDGNYPPVLSSSSSDDEESPKTVFHSPQGSSLSYEDSYYTPISRHSSLVNGGQPASVRSETYSATSIPYSKRTSPKSRLTASSPDIRQVMIPPIKQAPPVTAPAPPPPAPPLSQSCQNLDKEVTNGHSRRPKFSAPPPAPHLARIQSTSDTPQNISRTSLHPTPPPPPPPPPPPPPRQLTPRKAGSAAISVSSSSATRNQQSCSPKHGAGSANSVTKSSDDGDKSLSSSWRLEADDTEGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSKNPVPTEPIRRSVLPPVERENRVLDPKKSQNIAILLRALNVTRDEVSDALLDGNPEALGAELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKQVLDIPFAFKRVEAMLYRANFDAEVNYLRKSFQTLEVASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGANGDSANGNFQNQVNTKFSEDDFKKQGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEKGLDKVKVAFQHEKPDTQGNFFHSTKLFLKNAEEEIVRIKADERKALFLVKEVTEYFHGNASKEEAHPLRIFMIVRDFLNILDQVCKEVGIMQQERNVIGSSRSFRIAASASLPVLNRYNARQDRSSDEESSSP	900

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr9g00435	900	MobiDBLite	consensus disorder prediction	402	440	-	-
	Accr9g00435	900	SMART	it6_source	451	863	IPR015425	-
	Accr9g00435	900	MobiDBLite	consensus disorder prediction	146	455	-	-
	Accr9g00435	900	MobiDBLite	consensus disorder prediction	313	330	-	-
	Accr9g00435	900	MobiDBLite	consensus disorder prediction	167	202	-	-
	Accr9g00435	900	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	451	875	IPR015425	-
	Accr9g00435	900	MobiDBLite	consensus disorder prediction	376	397	-	-
	Accr9g00435	900	PANTHER	FORMIN-RELATED	7	894	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Accr9g00435	900	MobiDBLite	consensus disorder prediction	222	301	-	-
	Accr9g00435	900	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	383	861	-	-
	Accr9g00435	900	Pfam	Formin Homology 2 Domain	455	848	IPR015425	-
	Accr9g00435	900	Gene3D	Formin, FH2 domain	449	860	IPR042201	-
	Accr9g00435	900	MobiDBLite	consensus disorder prediction	361	375	-	-
	Accr9g00435	900	MobiDBLite	consensus disorder prediction	43	89	-	-
	Accr9g00435	900	MobiDBLite	consensus disorder prediction	40	89	-	-
	Accr9g00435	900	MobiDBLite	consensus disorder prediction	441	455	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr9g00435	Accr-Chr9	4810132	4813802	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr9g00435	26	890	FH2 protein (formin) Gene Family	AT5G67470	57.642	0.0	851

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr9g00435	-		-	pcin:129322910	1395.18