Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00426 ATGAGTTGCAACGGCTGCCGAGTCCTTCGAAAAGGCTGCAGCAAGTCTTGTATTCTGCGGCCTTGCTTGCAGTGGATCGACACGCCCGAAGCCCAAGGGCATGCCACTGTCTTCGTCGCTAAGTTCTTTGGCCGCGCGGGTCTCATGTCCTTCATTTCCAACGTTCCTGAAAATCAAAGGCCTGCTCTGTTTCAGTCTTTGTTGTTCGAAGCATGTGGGCGAACGGTGAATCCGGTGAACGGAGCGGTGGGGCTTCTGTGGACGGGAAACTGGCACGTGTGTCAGGCGGCCGTTGAGACGGTACTGCGTGGTGGTACGTTAAGGCTCATTCCTGAGCTTATTGGCTTGGATGCTTCTACTCTAGCTGCCGACGAGGCGTCTGAGGCGGAAGTGGCCTGCACCGACATGTGGAGCATCAGGGATCCGAACCTGAGTTGCCGGTTCACGAATTCGCGATCTAACAAGTTCTCTTCCTGCAAACGCAAGCGATCGGATGAATCCAACCAGCCTCAGAAGGCCGATCTTGATCTCCGGTTGATGCCGAGTTTCCTGCGGAAAGTGTCTAGCTATAGCTGCAAGCCGGAAATCGGCGGGCCGGGTACGCCGTCGATGAACTCAGAGGAATCCGTGACGACGACGGTGTGCCTGGAAAGTGGACCTGGAGTTCACTACGGTCATGCCGGAGAGCCCAAACTTCTCAACTTTTTCGCTTGA 714 0.556 MSCNGCRVLRKGCSKSCILRPCLQWIDTPEAQGHATVFVAKFFGRAGLMSFISNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRLIPELIGLDASTLAADEASEAEVACTDMWSIRDPNLSCRFTNSRSNKFSSCKRKRSDESNQPQKADLDLRLMPSFLRKVSSYSCKPEIGGPGTPSMNSEESVTTTVCLESGPGVHYGHAGEPKLLNFFA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00426 237 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Accr9g00426 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 210 - -
Accr9g00426 237 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00426 Accr-Chr9 4677503 4678309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00426 1 237 AS2 family AT3G49940 57.647 2.32e-84 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr9g00426 LOB 3.8e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00203 10 3652963 3653802 Accr9g00426 9 4677503 4678309 CCT
Accr9g00426 9 4677503 4678309 Accr10g00203 10 3652963 3653802 ECH
Accr9g00426 9 4677503 4678309 Accr9g00426 9 4677503 4678309 ECH