Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00425 ATGACGCAGTTCACAGCTTCACTTCCTTCTTTGCACCAAATCACCACCACCACTTCTTTCTCCTCCAGAAACAAGGATAATCAGATTCATAGAACTCGACCCTGGCCCGGATTCCCTTCCTCCACCGCCTTCAATTCCTTCGGCGGCGCTAATTGCATGGAACAATTACTTGTTCACTGTGCCAACGCCATCGAATCCGACGACGTCACTCTTGCCCAGCAAATCCTCTGGGTTCTGAACAACATCGCCTCTCCCGACGGCGACTCCAATCAACGCCTCGCATCCGCCTTCAACCGCGCCCTCGCAGCCCGCGCCGCCAAATCCGGAAGCTGCAAAATGCTCGCCGTCGTGGCCGACGTAGCTCACAACACCAACCTCGCCGCTATAGACATCCACAGCTTCTCCGTTATCGAGCTCGCCAACTTCGTGGACCTAACCCCTTGGCACCGATTCGGCTTTACTGCCGCAAACTCGGCCATTCTAGAAGTTACCGAGGGATTTTCAGTCATTCACATCGTCGACTTAAGCTCCACGCATTGCATGCAGATTCCCACGCTCATCGACGCCATCGCCACCCGCCACGAGGTCCCTCCGTTAATCAAGCTCACCGTCTCAGCTTCAAATAAGGACATTCCTCCCATACTTAACCTCTCCTACGACGAATTAGGCGCGAAGCTGGTAAGCTTCGCGAGGTCTAAGAACATAATATTGGAATTCAAAGTGATTTCCTCGAGTTATAAAGACGGATTCGCTTCTCTGATCGAACACCTTCGGTTGCAACAGATGGTTTTGGCGGCAGAAGGTAACAGAAGGGAAGCTCTGGTGATAAACTGTCACATGATGCTTCATTACATCCCAGACGAAACCCTAGAATCAGACCCTTCAATCTCGAACTCTTACATTTACGAATCGTCGTCGTTGCGATCGATGTTTCTGAGGGCGGTGCGGAGCCTAGAGCCGACGATTGTAGTTTTAGTGGACGAAGACGCGGATTTGACATCTAACAATCTGGTGACTAGGCTGAGGTCAGCGTTTAACTACCTGTGGATACCGTATGACACGGTGGACACGTTTTTGCCGAAAGGGAGCCGGCAACGGCAGTGGTACGAGGCGGATATAAGCTGGAAGATAGAGAATGTGATAGCGCAGGAAGGGTTACAAAGGGTGGAGAGGGTGGAGCCAAAGAGCAGGTGGGAGCAGAGGATGAGGAATGTCAAGTTTCAAGGGGTTGGGTTGAGTGAGGAGGGAGTTTCAGAGATGAAGGCGATGCTTGATGAGCATGCAGCTGGGTGGGGATCGAAGAAGGAAGATGAACATCTTGTTCTTACCTGGAAAGGACACAATGTCGTTTTTGCTTCTATTTGGATGCCTGCTTGA 1377 0.5142 MTQFTASLPSLHQITTTTSFSSRNKDNQIHRTRPWPGFPSSTAFNSFGGANCMEQLLVHCANAIESDDVTLAQQILWVLNNIASPDGDSNQRLASAFNRALAARAAKSGSCKMLAVVADVAHNTNLAAIDIHSFSVIELANFVDLTPWHRFGFTAANSAILEVTEGFSVIHIVDLSSTHCMQIPTLIDAIATRHEVPPLIKLTVSASNKDIPPILNLSYDELGAKLVSFARSKNIILEFKVISSSYKDGFASLIEHLRLQQMVLAAEGNRREALVINCHMMLHYIPDETLESDPSISNSYIYESSSLRSMFLRAVRSLEPTIVVLVDEDADLTSNNLVTRLRSAFNYLWIPYDTVDTFLPKGSRQRQWYEADISWKIENVIAQEGLQRVERVEPKSRWEQRMRNVKFQGVGLSEEGVSEMKAMLDEHAAGWGSKKEDEHLVLTWKGHNVVFASIWMPA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00425 458 MobiDBLite consensus disorder prediction 17 37 - -
Accr9g00425 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 444 IPR005202 -
Accr9g00425 458 ProSiteProfiles GRAS family profile. 44 456 IPR005202 -
Accr9g00425 458 Pfam GRAS domain family 53 455 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00425 Accr-Chr9 4660542 4661918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00425 38 457 GRAS Transcription Factor Family AT3G49950 58.156 4.35e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr9g00425 GRAS 2.8e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00425 - - cave:132187639 652.899