Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00413 ATGTATCACCGGCGCCCAATTTCTCAAATATCATTTATATCACACTGCAATGACTCAATGCGCTATCGCATGTTCCCGTGTCCAATTTGTAGAGCTCACGGTTTCAGCAGTAAGTCGGAGTCTGCTTGGACCGATTTCCCGGTGGAAAATGCGTACGAGCTGTTAGGAGTGTCACAGACCAGTTCGTTTGCTGAAATTAAAGCGTCTTTTCGCAGATTGGCCAAGGAAACTCACCCAGACCTTGCTGACTCAATTAGCGACTCATCTGCTTCGGGAAGATTTGTGCAAATCCTGGCCGCCTACGAGATTCTTTCAGATTCCAAGAAGAGAGCTCATTATGACAGATACCTGTTGTCTCAAAAGAAGCTTGTGGAGAAGCATACTAGGCAGGGTTCAAAATTACACTTCTATAGATCACATGAAACAACTTCCAAGGAGATGGAAGTTGTTGAATGGTTAAAGTGGTACAGATTAGCTATAAATGATATTTTGTCAGAGAAGAGGGTAGTAGTTGGAACAGGCTATTTTGATGTACTTGAGAGAGATTTTTACTCAGCCATACATGCGGCTTACTTTGGCCCTGAGATTGAGTCAATGGAGCTTCTCCCTGAGTGCTTTGAGGCAGAGGAAAGGTCCTCTTGTGAAACACCGGAGGTTTTGCACTTAGTTTCAGGTCGTGATCTTTTTGGGATGGTTTGCCTAGCTAGTAAGAACCCAGAGATATCATCTACCAGTAATGAAAAGTTAACTTCTTTCAGATCCTTCCATCCAGGCCTATGTCAATCTATAAAGAATGCAAACATTCACACAAATGCAGAAGTTCCATATGAATTTGGAATTCCACGACTTCATGACTCTAAAATATCAAGTCATATATCAGATGCATATAGAGATCTAGAATTGCTTGTATCTGGAAGGGTGGTTGCTGTGGCCTCCAGGTTCCCTCCTGGAAGCTATTCTGATGCTGAAGTAGCAGAGGATCACATTCATGTTTATCTTAATTCAGATGAATACACCAACCATACCAACAACTGTGATTCTAAAAATTACTTCACAAGTAGTTCAGCTGTCACACGAACTCATATAGGAACCATAGCTGGGCTTGGGACCAGTTCAGACGAGAGTTCCTGTAATGTCTATGACAGTAGAGGGGCAAAGACCCATGTGATTATGAAACACAGGACCTTGCTGGTGAAGCACATGCACTGGTATCAAATTGGAGAAAAGGTTTCTATTTGTGAGTGTAGATGCACGAGAGCGAAATTACCATCAAGCAAATATTGGCTATTTGAGCCTCGTTGTGGTTTGCATGACATAGGGGGTTGGTATGTTGAAACGTATGGCAAAGATAAGAAAGGTCTAACTATCCCATCTCAAAGGTTATGGGATGGCTGGGATGACGGTCAGCATTTTGAGAGAAGACTTCATCCAGCAATGTATCTACTTGCTCTTGCTTATAGGACACTTGATCTTGAATATGCCAAAGTAAGAAAACAAACATTTAGGAAAGCTGTGGAAGGGCATCTGTTTAGAATCCTTCGTTGGTGCAAAAGACTTGGTTAA 1563 0.4223 MYHRRPISQISFISHCNDSMRYRMFPCPICRAHGFSSKSESAWTDFPVENAYELLGVSQTSSFAEIKASFRRLAKETHPDLADSISDSSASGRFVQILAAYEILSDSKKRAHYDRYLLSQKKLVEKHTRQGSKLHFYRSHETTSKEMEVVEWLKWYRLAINDILSEKRVVVGTGYFDVLERDFYSAIHAAYFGPEIESMELLPECFEAEERSSCETPEVLHLVSGRDLFGMVCLASKNPEISSTSNEKLTSFRSFHPGLCQSIKNANIHTNAEVPYEFGIPRLHDSKISSHISDAYRDLELLVSGRVVAVASRFPPGSYSDAEVAEDHIHVYLNSDEYTNHTNNCDSKNYFTSSSAVTRTHIGTIAGLGTSSDESSCNVYDSRGAKTHVIMKHRTLLVKHMHWYQIGEKVSICECRCTRAKLPSSKYWLFEPRCGLHDIGGWYVETYGKDKKGLTIPSQRLWDGWDDGQHFERRLHPAMYLLALAYRTLDLEYAKVRKQTFRKAVEGHLFRILRWCKRLG 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00413 520 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Accr9g00413 520 SUPERFAMILY Chaperone J-domain 48 119 IPR036869 -
Accr9g00413 520 PRINTS DnaJ domain signature 70 85 IPR001623 -
Accr9g00413 520 PRINTS DnaJ domain signature 89 109 IPR001623 -
Accr9g00413 520 PRINTS DnaJ domain signature 52 70 IPR001623 -
Accr9g00413 520 CDD DnaJ 50 106 IPR001623 -
Accr9g00413 520 SMART dnaj_3 49 109 IPR001623 -
Accr9g00413 520 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 21 519 - -
Accr9g00413 520 Pfam DnaJ domain 50 114 IPR001623 -
Accr9g00413 520 ProSiteProfiles dnaJ domain profile. 50 117 IPR001623 -
Accr9g00413 520 Gene3D DnaJ domain 41 138 IPR036869 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00413 52 114 C2H2 Transcription Factor Family AT1G74250 48.485 3.14e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00413 - - gmx:100805332 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00413 9 4542611 4546996 Accr9g00413 9 4542611 4546996 ECH