Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00406 ATGTTGGAATTCTGCCGAAGGCCATTAAAGGCATGCTTTGGTAGAGGAGCAGACGATGGGCTTCTCTGGCATACAAACTTGAAGACACACGCTTTAGGTGATTATTCAATTGCTATAGTTCAAGCTAACTCGACTCTTGAAGACCAAAGTCAAGTTCTTACCTCTCCTTCTGCAACTTACGTTGGCATATATGACGGACATGGTGGTCCGGAGACTTCTCGATTCATAGCCGACAATCTCTTCCCCTTTCTCCAGAAGTTTGCTTCTGAAGAAGGTGGGTTATCGGAGTCCGTGATAAAGAAGGCCTTCAATGAAACTGAAGAGAAATTTTTACAGTTCGTGAAACAATCATTGACTAGTCGGCCGCAGATTTGTTCAGTGGGGTCGTGTTGTCTTGTTGGGGTGATTTCAAACAATGTTCTTTATGTTGCAAATCTTGGGGATTCGAGGGTAGTTCTGGGTAAGAAAGTTGATTCTTCTGTTGTGGCAGAACGTCTGTCCACTGATCATAATGTTGGGGTGGAAGAGATTAGAAATGAAGTTATGGCGCTTCACCCTGATGATGCACACATTGTAGTTTACACTCATGGAGTTTGGAGAATCAAAGGAATTATTCAGGTGTCAAGATCAATTGGAGATGTTTTTCTAAAGAAACCTGAGTTTAATAGAGATCCTCTGTTCCAACAATTTGGATACTGGTTTCCTTTAAAGCGACCTGTAATGACAGCTGAACCTTCAGTATTGAGTCGAACGTTAACGCCAGAGGACATGTTCTTGATATTTGCATCTGATGGGCTTTGGGAGCATTTAACTGATGAAGCTGCCGTTGACATCATCCACAAAAATCCAAGACCAGGAATAGCAAAGAGATTGGTGAGAGCTGCACTAGAAGAGGCTGCAAGGAAAAAAGAAATGAGATATAAGGATTTAACAAGAGTTCAGAAAGGTGAAAGGCGCCATATTCATGATGACATTACAGTTATCGTCGTATACTTGGATCAGTATCCACACAATTCATTAAGTGGGTCGAAACGACATGGCGTCTATGGCTACACTAATGCTCCTGTTGATATCTTCTCTCTTAATAATGCAGATAAAGATGATCTCTAA 1110 0.4162 MLEFCRRPLKACFGRGADDGLLWHTNLKTHALGDYSIAIVQANSTLEDQSQVLTSPSATYVGIYDGHGGPETSRFIADNLFPFLQKFASEEGGLSESVIKKAFNETEEKFLQFVKQSLTSRPQICSVGSCCLVGVISNNVLYVANLGDSRVVLGKKVDSSVVAERLSTDHNVGVEEIRNEVMALHPDDAHIVVYTHGVWRIKGIIQVSRSIGDVFLKKPEFNRDPLFQQFGYWFPLKRPVMTAEPSVLSRTLTPEDMFLIFASDGLWEHLTDEAAVDIIHKNPRPGIAKRLVRAALEEAARKKEMRYKDLTRVQKGERRHIHDDITVIVVYLDQYPHNSLSGSKRHGVYGYTNAPVDIFSLNNADKDDL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00406 369 Pfam Protein phosphatase 2C 53 301 IPR001932 -
Accr9g00406 369 PANTHER PROTEIN PHOSPHATASE 35 331 IPR015655 GO:0004722|GO:0006470
Accr9g00406 369 Gene3D - 23 338 IPR036457 -
Accr9g00406 369 FunFam Probable protein phosphatase 2C 42 25 339 - -
Accr9g00406 369 ProSiteProfiles PPM-type phosphatase domain profile. 34 332 IPR001932 -
Accr9g00406 369 CDD PP2Cc 41 332 IPR001932 -
Accr9g00406 369 SUPERFAMILY PP2C-like 38 334 IPR036457 -
Accr9g00406 369 Coils Coil 293 313 - -
Accr9g00406 369 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
Accr9g00406 369 SMART PP2C_4 24 330 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00406 Accr-Chr9 4508134 4510417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00406 16 342 PP2C-type Phosphatase Gene Family AT3G51370 53.116 1.01e-138 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00406 - K01102 cave:132187761 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00406 9 4508134 4510417 Accr9g00406 9 4508134 4510417 ECH