Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00386 ATGAATAACACAGTGGCCGCTAGGAGGGATATGGACCGGATTAAGGGTCCCTGGAGCCCCGAGGAGGACGAGGCCTTGCAGAAGCTCGTAGAGAAGCATGGCCCCAGGAATTGGTCCTTGATCAGCAAGTCCATTCCCGGTCGATCCGGCAAGTCTTGCAGGCTTCGCTGGTGCAATCAGCTCTCCCCTCAGGTCGAGCACAGGGCATTTACGCCCGAAGAGGATGAGACTATCATCAGGGCTCATGCCCGTTTCGGCAACAAATGGGCTACCATCGCTCGCCTGCTCTCTGGCCGAACTGATAACGCCATCAAGAACCACTGGAACTCTACCTTGAAGCGCAAGTGTTCATCCATGATGATCGATGACGCCGGTGCTGTCGGTGGATTCGATGGTAGTTTCAGCCCGCAGCCGCTCAAGAGATCGGTCAGTGCCGGCGCCGCTGTACCCGTCTCCACTGGCCTGTGCATGAATCCACCCACGCCGGGCAGCCCCTCTGGATCCGATGTGAGCGAGTCCAGTTTTCCCGTTGCGTCTTCCTCTCAAGTCTATCGACCTGTCCCGAGAGCCGGCGGGGTTTTACCTCCCGTAGAAACGACATCATCTTCCAATGACCCTCCCACGTCATTATCTCTGTCTCTTCCCGGCGTAGACTCTTCTGAAGTCTCTAATCGACCTGCAGACCCAACACATTCTGCACCGCCGGCCAACAGTACGCGCTTGTTATCCATAATGGCGCCGACGCCAACTCCGGCTCTCCCGCCCGCCCCACCTCCGGTTCCGACATCAGCTCCGATGTCGGTGCCGCAGCAGGTTCATTTGGGTAGGGATGATCGAAGTGGCGAGAGGGGTCCGAATCAGAACGGATTCTTAGGTTTTAATTTCAGTTCGGAGTTGCTAGCTGTGATGCAAGACATGATTAGGAAGGAGGTGAGGAGTTATATGGCGGGGTTGGAGCAGCAGAATGGGGTGTGTTTTCAGGCATCTGATGGATTTCGAAACGCTTCGGTGAAGCGTATTGGAATTAGTAGGATCGATTCATGA 1044 0.5575 MNNTVAARRDMDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMMIDDAGAVGGFDGSFSPQPLKRSVSAGAAVPVSTGLCMNPPTPGSPSGSDVSESSFPVASSSQVYRPVPRAGGVLPPVETTSSSNDPPTSLSLSLPGVDSSEVSNRPADPTHSAPPANSTRLLSIMAPTPTPALPPAPPPVPTSAPMSVPQQVHLGRDDRSGERGPNQNGFLGFNFSSELLAVMQDMIRKEVRSYMAGLEQQNGVCFQASDGFRNASVKRIGISRIDS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00386 347 FunFam Transcription factor MYB44 69 115 - -
Accr9g00386 347 CDD SANT 69 112 IPR001005 -
Accr9g00386 347 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr9g00386 347 SMART sant 14 63 IPR001005 -
Accr9g00386 347 SMART sant 66 114 IPR001005 -
Accr9g00386 347 PANTHER MYB PROTEIN-RELATED 15 218 - -
Accr9g00386 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 116 IPR017930 -
Accr9g00386 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 65 IPR017930 -
Accr9g00386 347 Gene3D - 68 124 - -
Accr9g00386 347 Gene3D - 14 66 - -
Accr9g00386 347 MobiDBLite consensus disorder prediction 157 181 - -
Accr9g00386 347 CDD SANT 17 59 IPR001005 -
Accr9g00386 347 FunFam MYB transcription factor 15 66 - -
Accr9g00386 347 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Accr9g00386 347 MobiDBLite consensus disorder prediction 196 245 - -
Accr9g00386 347 MobiDBLite consensus disorder prediction 156 269 - -
Accr9g00386 347 Pfam Myb-like DNA-binding domain 18 76 - -
Accr9g00386 347 MobiDBLite consensus disorder prediction 248 265 - -
Accr9g00386 347 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00386 Accr-Chr9 4242381 4243424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00386 7 346 MYB Transcription Factor Family AT4G37260 50.000 2.57e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr9g00386 Myb_DNA-bind_6 7.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00386 K09422 - qsa:O6P43_024595 481.87