Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00384 ATGTGGCACTCAAGAGTTGGTCTCCATTTATGGTGGAGTATTATTTTGGTGTTTCTCGTTGTTAATCAGTGCTCTGGCCTGAACAGAGACGGTGCTTTGTTGTTGTCCTTTAAGTACTCTGTTGTGAGTGATCCTGTTGGCGTGCTTAGAAGCTGGAATTACAGCAACGAAACACCTTGTTCATGGAATGGAGTTACGTGTTCGAATATTTCAAGTGCAGAACAGAATGCTCAAGCTCGAGTGATTGGCTTATCTCTTCCAAATTCCAAGCTTGTGGGTTCAATTCCTTATGATCTGGGTTTGATTGACCACCTCAGAATTCTCGACCTTTCTGGCAATTCACTCAATGGGTCTCTTCCCTCCTCACTTTTTCAGGCTTTTGAACTTGAGTCTCTTAATTTGTCTGGTAATTTGATAGGTGGGGAGTTTTCTGACTCCATAGTACAGCTTAGAAACCTGCAGGTTCTCAACCTTTCTGACAATGCCTTGGCTGGAAAAATACCTACCAATCTGGCAAATATGCAAAATCTAACAGTGGCTTCTTTGAATAATAATTACTTGTCGGGTTCTCTTCCTGGTGGGTTTCAAACGTTACAGGTTTTAGATCTATCTTCCAATTTGTTCAATGGCTCTCTGCCCCCAGATTTTGGCGGAGCAAGTTTGCGGTACTTAAACATCTCCTACAACAACATTCCGGGGAAAATCCCTCCAGAGTTTGCAGAGAAAATCCCAGGTAACGCCACCATCGACCTTTCCTTCAACAATCTCACCGGCCAGATTCCTGATTCCTTAGTTTTAATCAATCAACAGTCCGAGTCATTTTCCGGGAACCCTGATCTTTGTGGAGAACCAACCAAGAATGCATGTTCTGTTCCTCCTCCATCTTCTCCACCAAATATTCCCGTTGCTACTTCCCCTGCTTTGGCTGCATTTCCCAAAACGCTTGACTCTCCTCCTGATTTCGCTACTTCACCTTCTGTATCTTCGCACTCCAAGCGTAACGGGATTCGACGAACAACAGTTATAGGAATCGTGGTTGGAGATATTGTTGGCATTATAATCATAGCTTTAATTTTCGTGTATGTCTACCAGTTGAAGAGAGAAAAAAATGTCGAGAGCGCATTGAAGATGGAAGCTACTGCAGTGAGGAGTGATTGGTCGCCGCCGTCATCACCGGAGTCAAGAGGGTTCAGAAGGTGGTCGTGCTTGAGCAAGAAAGAGAAAGAGCCCACCGACGACGACACCACAAGCTCTTCCGGCAGCGAAGTGGAAGCACAAAATGGACAAAACCGAAAGGTTCATGACAATCGGAGACAACATGAACAAGAAGCAGGACAGGGGAAAACAGGGACACTAATAACAGTGGACGGTGAAAAAGAGCTTGAAGTGGAAACACTGCTAAAAGCTTCGGCATTTATACTGGGGGCAACTGGTTCCAGTATAATGTACAAAGCCGTGCTTGAAGATGGTTCGGCGTTAGCGGTTCGAAGAATCGGAGAGAATGGGCTCGAACGGTTCAAGAACTTGGAGACACAAGTCCGGGTCATAGCCAAATTGGTCCACCCCAATTTGGTTCGTGTTCGTGGCTTCTACTGGGGAAACGACGAGAAGCTCATCATCTACGACTTCGTCCCAAACGGCAGCCTCGCAAATTTCCGTTACAGGAAGGTGGGCTCTTCTCCTTGTCATCTACCATGGGAGGTTAGACTCAAGATCGCGAGAGGCGTGGCACATGGCTTGGCATATCTTCACGACAAGAAGCACGTGCATGGAAATCTGAAGCCCAGCAACATTCTGTTGGGCAACGACATGGAGCCCAAGATTGGAGACTTTGGGCTCGAGAGAATGGTAACCGGAGATTCCAGTTGTAAAGCTGGCGCATCGGCCCGGATTTTTGGTAGCAAGAGATCCACGGCCTCTAGGGATAGCTTTCCAGACGTTGTAGTTGGGCCCAGCCCAAGCCCAAGCCCGAGTACCATAGGTGGAGTGTCTCCTTACCATGCACCGGAGTCGCTCAGAAACCTGAAGCCAAATCCGAAGTGGGATGTATACTCCTTCGGCATCATTTTCTTGGAGCTATTGACTGGGAAGATTGTGGTTTTGGACGATATGGGTCAACCACCTGGGTTTTTGGTTGAAGACAAGGCCCGGGCTCTTCGGATGGCTGACATGGCGATTCGTGCTGACATGGAGGGAAAAGAGGAGTCGTTATTGGCTTGGTTGAAGTTAGGATATAGTTGTGTGTCTAGCGTGCCCCAGAAGAGGCCATCCATGAAAGAAGTGTTGCAAGTAATTGAGAAAACACCCTCCTCACGTTATTATGCTCACTAA 2331 0.4706 MWHSRVGLHLWWSIILVFLVVNQCSGLNRDGALLLSFKYSVVSDPVGVLRSWNYSNETPCSWNGVTCSNISSAEQNAQARVIGLSLPNSKLVGSIPYDLGLIDHLRILDLSGNSLNGSLPSSLFQAFELESLNLSGNLIGGEFSDSIVQLRNLQVLNLSDNALAGKIPTNLANMQNLTVASLNNNYLSGSLPGGFQTLQVLDLSSNLFNGSLPPDFGGASLRYLNISYNNIPGKIPPEFAEKIPGNATIDLSFNNLTGQIPDSLVLINQQSESFSGNPDLCGEPTKNACSVPPPSSPPNIPVATSPALAAFPKTLDSPPDFATSPSVSSHSKRNGIRRTTVIGIVVGDIVGIIIIALIFVYVYQLKREKNVESALKMEATAVRSDWSPPSSPESRGFRRWSCLSKKEKEPTDDDTTSSSGSEVEAQNGQNRKVHDNRRQHEQEAGQGKTGTLITVDGEKELEVETLLKASAFILGATGSSIMYKAVLEDGSALAVRRIGENGLERFKNLETQVRVIAKLVHPNLVRVRGFYWGNDEKLIIYDFVPNGSLANFRYRKVGSSPCHLPWEVRLKIARGVAHGLAYLHDKKHVHGNLKPSNILLGNDMEPKIGDFGLERMVTGDSSCKAGASARIFGSKRSTASRDSFPDVVVGPSPSPSPSTIGGVSPYHAPESLRNLKPNPKWDVYSFGIIFLELLTGKIVVLDDMGQPPGFLVEDKARALRMADMAIRADMEGKEESLLAWLKLGYSCVSSVPQKRPSMKEVLQVIEKTPSSRYYAH 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00384 776 FunFam Leucine-rich repeat receptor-like protein kinase 27 193 - -
Accr9g00384 776 SUPERFAMILY L domain-like 28 284 - -
Accr9g00384 776 Gene3D Transferase(Phosphotransferase) domain 1 544 774 - -
Accr9g00384 776 MobiDBLite consensus disorder prediction 399 415 - -
Accr9g00384 776 MobiDBLite consensus disorder prediction 428 444 - -
Accr9g00384 776 MobiDBLite consensus disorder prediction 639 665 - -
Accr9g00384 776 Gene3D Phosphorylase Kinase; domain 1 431 543 - -
Accr9g00384 776 SUPERFAMILY Protein kinase-like (PK-like) 473 765 IPR011009 -
Accr9g00384 776 FunFam Leucine-rich repeat receptor-like protein kinase 197 291 - -
Accr9g00384 776 Pfam Leucine Rich Repeat 104 125 IPR001611 GO:0005515
Accr9g00384 776 Pfam Leucine Rich Repeat 220 239 IPR001611 GO:0005515
Accr9g00384 776 MobiDBLite consensus disorder prediction 380 453 - -
Accr9g00384 776 ProSiteProfiles Protein kinase domain profile. 438 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00384 776 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 84 767 - -
Accr9g00384 776 Pfam Protein kinase domain 474 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00384 776 SMART LRR_typ_2 150 174 IPR003591 -
Accr9g00384 776 SMART LRR_typ_2 195 218 IPR003591 -
Accr9g00384 776 SMART LRR_typ_2 102 126 IPR003591 -
Accr9g00384 776 PRINTS Leucine-rich repeat signature 150 163 - -
Accr9g00384 776 PRINTS Leucine-rich repeat signature 105 118 - -
Accr9g00384 776 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Accr9g00384 776 CDD STKc_IRAK 474 767 - -
Accr9g00384 776 Gene3D Ribonuclease Inhibitor 195 291 IPR032675 -
Accr9g00384 776 Gene3D Ribonuclease Inhibitor 27 194 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00384 Accr-Chr9 4203171 4205868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00384 8 776 Receptor kinase-like Gene Family AT4G37250 55.864 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr9g00384 Pkinase 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00384 - - qsa:O6P43_024597 1046.19