Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00376 ATGGCCGTGGAGCTCATGATGGGTTACAGGAACGATAGCTTCGCAGCCAAAATGGATGATAATGTTGTTCAGGAAGCTGCCTCAGGCCTCGAGAGCGTCGAGAAGCTCATCAGGTTACTTTCGCAGACTCAGCAACAATTCCACTCCTCTTCTTCTTCTTCCGCTTCTAAGTCTTCCCTCGATATCGAGATGGACTGTAAAGCCGTCGCCGACGTCGCCGTTTCCAAGTTCAAGAAGGTTATTTCTCTTCTGGATCGAACCAGAACCGGTCATGCTCGATTTAGAAGAGCCCCTCTGCCGCAACCTCCACCACCTCCTCCTCCTCCTGCCGTTAATCAAAACCCCGAGCCACAACCTTCTGAGCCAAAAGTTTATTATGCGACGCCGTTGCAGCAGATCCCGCCGGCCCTTCTTCAACACCAACCTCTCGGCGAACAACATCCCCTGATCCCAAAAAATGGGGTGATTGAGAGGAAGGACTCGTTTAAAACCATTAATTTCTCGTATTCCTCTGCCGCGACTTCGTTTATGTCGTCTCTTACTGGCGATACGGATAGTAAACACCCGTCCTCGTCGTCGCCAGCGACCGCTTTTCAGATCACGAATCTGTCTCAGGTATCCTCAGCGGGAAAGCCTCCTCTTTCTTCTTCGCTGAAGAGAAAGTGTAGCTCCGAGAACTTGGGTTCCGGCAAGTGCGGCAGTTCCTCTAGTCGTTGCCATTGTAATAAAAAGAGCAGAAAAATGCGGTTGAAGAGAGTAGTGAGGGTGCCTGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCATGGAGGAAGTATGGACAGAAACCCATTAAAGGATCCCCTCATCCTAGGGGATACTACAAGTGCAGTAGTGTTAGAGGGTGTCCGGCACGCAAACACGTAGAGCGAGCTCTGGACGATCCATCCATGTTAGTAGTCACCTATGAAGGCGATCATAATCACTCACTCTCTGCCACCGATTCAACGAATCTTATATTGGAATCTTCTTAG 1023 0.4946 MAVELMMGYRNDSFAAKMDDNVVQEAASGLESVEKLIRLLSQTQQQFHSSSSSSASKSSLDIEMDCKAVADVAVSKFKKVISLLDRTRTGHARFRRAPLPQPPPPPPPPAVNQNPEPQPSEPKVYYATPLQQIPPALLQHQPLGEQHPLIPKNGVIERKDSFKTINFSYSSAATSFMSSLTGDTDSKHPSSSSPATAFQITNLSQVSSAGKPPLSSSLKRKCSSENLGSGKCGSSSSRCHCNKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHSLSATDSTNLILESS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00376 340 MobiDBLite consensus disorder prediction 91 123 - -
Accr9g00376 340 Gene3D WRKY domain 253 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr9g00376 340 ProSiteProfiles WRKY domain profile. 262 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr9g00376 340 SMART WRKY_cls 267 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr9g00376 340 Pfam Plant zinc cluster domain 219 265 IPR018872 -
Accr9g00376 340 MobiDBLite consensus disorder prediction 97 116 - -
Accr9g00376 340 FunFam WRKY transcription factor 65 251 328 - -
Accr9g00376 340 MobiDBLite consensus disorder prediction 203 239 - -
Accr9g00376 340 SUPERFAMILY WRKY DNA-binding domain 264 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr9g00376 340 MobiDBLite consensus disorder prediction 203 240 - -
Accr9g00376 340 Pfam WRKY DNA -binding domain 269 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr9g00376 340 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 332 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00376 Accr-Chr9 4152236 4153612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00376 17 325 WRKY Transcription Factor Family AT2G24570 46.154 2.68e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr9g00376 WRKY 7.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00376 - - qsa:O6P43_033850 486.108