Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00375 ATGGCCGTGGAGCTCATGATGGGTTACAGGAACGATAGCTTCGCAGCCAAAATGGATGATAATGTTGTTCAGGAAGCTGCCTCAGGCCTCGAGAGCGTCGAGAAGCTCATCAGGTTACTTTCGCAGACTCAGCAACAATTCCACTCCTCTTCTTCTTCTTCCGCTTCTAAGTCTTCCCTCGATATCGAGATGGACTGTAAAGCCGTCGCCGACGTCGCCGTTTCCAAGTTCAAGAAGGTTATTTCTCTTCTGGATCGAACCAGAACCGGTCATGCTCGATTTAGAAGAGCCCCTCTGCCGCAACCTCCACCACCTCCTCCTCCTCCTGCCGTTAATCAAAACCCCGAGCCACAACCTTCTGAGCCAAAAGTTTATTATGCGACGCCGTTGCAGCAGATCCCGCCGGCCCTTCTTCAACACCAACCTCTCGGCGAACAACATCCCCTGATCCCAAAAAATGGGGTGATTGAGAGGAAGGACTCGTTTAAAACCATTAATTTCTCGTATTCCTCTGCCGCGACTTCGTTTATGTCGTCTCTTACTGGCGATACGGATAGTAAACACCCGTCCTCGTCGTCGCCAGCGACCGCTTTTCAGATCACGAATCTGTCTCAGGTATCCTCAGCGGGAAAGCCTCCTCTTTCTTCTTCGCTGAAGAGAAAGTGTAGCTCCGAGAACTTGGGTTCCGGCAAGTGCGGCAGTTCCTCTAGTCGTTGCCATTGTAATAAAAAGAGAAAAATGCGGTTGAAGAGAGTAGTGAGGGTGCCTGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCATGGAGGAAGTATGGACAGAAACCCATTAAAGGATCCCCTCATCCTAGGGGATACTACAAGTGCAGTAGTGTTAGAGGGTGTCCGGCACGCAAACACGTAGAGCGAGCTCTGGACGATCCATCCATGTTAGTAGTCACCTATGAAGGCGATCATAATCACTCACTCTCTGCCACCGATTCAACGAATCTTATATTGGAATCTTCTTAG 1020 0.4941 MAVELMMGYRNDSFAAKMDDNVVQEAASGLESVEKLIRLLSQTQQQFHSSSSSSASKSSLDIEMDCKAVADVAVSKFKKVISLLDRTRTGHARFRRAPLPQPPPPPPPPAVNQNPEPQPSEPKVYYATPLQQIPPALLQHQPLGEQHPLIPKNGVIERKDSFKTINFSYSSAATSFMSSLTGDTDSKHPSSSSPATAFQITNLSQVSSAGKPPLSSSLKRKCSSENLGSGKCGSSSSRCHCNKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHSLSATDSTNLILESS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00375 339 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr9g00375 339 MobiDBLite consensus disorder prediction 91 123 - -
Accr9g00375 339 Pfam Plant zinc cluster domain 219 264 IPR018872 -
Accr9g00375 339 Pfam WRKY DNA -binding domain 268 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr9g00375 339 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 331 IPR044810 GO:0003700
Accr9g00375 339 MobiDBLite consensus disorder prediction 203 237 - -
Accr9g00375 339 MobiDBLite consensus disorder prediction 97 116 - -
Accr9g00375 339 MobiDBLite consensus disorder prediction 203 239 - -
Accr9g00375 339 FunFam WRKY transcription factor 65 250 327 - -
Accr9g00375 339 SUPERFAMILY WRKY DNA-binding domain 263 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr9g00375 339 Gene3D WRKY domain 254 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr9g00375 339 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00375 Accr-Chr9 4152236 4153612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00375 17 324 WRKY Transcription Factor Family AT2G24570 45.679 1.42e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr9g00375 WRKY 7.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00375 - - qsa:O6P43_033850 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00375 9 4152236 4153612 Accr9g00375 9 4152236 4153612 ECH