Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00363 ATGTGGGATCTGAATGACTCGCCCGATTGGAGAAAGGACGAGGAATCCGAAGGTTGCTCTTCCTTGAAGACATCCATGGACGGAGACGACGACAAAGGGAAACGGGTCGGATCTATGTCCAATTCAAGCTCATCTGCGGTCGTCATCGAGGACGGATCGGAGGAGGAAGACGGCGAGAGGAGCAGAACATTGAAGAAGAAAAGCAGCAGCAGGATATTCGGGTTCTGTGTCAACCAGGACGAGTCCATGGACACTGACCCACCTGTGACCCGGCAGTTTTTCCCTGTGGAGGAGGAGGAGGAGGAGGCGGCGGCAGTGTCATCGGGTGGTGGACGGAGCACGGCCTTCCCTCGGGCTCACTGGGTGGGCGTGAGATTCTGTCAGCCGGAACCATTCTCCGCCGCTGCTGGTGGCAGAGGAAAATCCGTGGAAGTGTCGTCGCAGCCGATAAAGAAAAGCCGGCGAGGACCAAGGTCAAGAAGCTCTCAGTATAGGGGAGTCACGTTTTACAGAAGAACAGGTCGTTGGGAGTCACATATATGGGATTGTGGAAAACAAGTGTATCTGGGTGGATTTGACACGGCACATGCAGCTGCTCGTGCGTATGATAGAGCGGCCATTAAGTTCCGAGGAGTCGAGGCTGACATCAACTTCAACATTGAAGACTACGAAGAAGACTTGAAGCAGATGAGCAATTTAACAAAGGAAGAGTTTGTGCACGTACTTCGTCGACAAAGCACTGGGTTCCCCAGGGGAAGCTCCAAGTATAGAGGCGTAACTTTGCACAAATGTGGAAGATGGGAGGCTCGAATGGGCCAATTTCTTGGCAAAAAGTACGTTTATCTTGGTTTGTTTGACACGGAGATTGAAGCTGCAAGGGCTTATGACAAAGCAGCAATAAAATGTAATGGCAAAGAGGCCGTCACTAATTTCGATCCCAGCATCTACGAGAATGAGCTTAATTCTGAATCCTCGGGTAACGCTGCGGATCACAATCTGGACTTGAGTCTGGGCAATTCGAGCTCAAAGCAAGGCAGTAATAGTCAAGCCCTGGGGAATGATGCCCATAACAATGGAATGGATCACCACCAAATGGCATCGGAATCTAGTTGGAGGAACAATGGAGGATTACTCAGGCCTAAGTTGACACTGCTGGATGGTCAAACTCAGCTTCAATCTTCGGCATCAAGAGAAATGCAAAGATTTGGCGGCTACAGGACAACTAGAGAGCCTCAGATGCTCAACAGTTTTGCTCCATCCCATCTTCACCCACCAAGCTTTCATTTTCCGAGCAGCAGCAGTGAAGGGCGAATTGGGAGTGATCTTTCACTGTCAATGAATGATCATCATCACCATCACCAATTGGGGCCTCCTCCTCCTCCTCATCAGGCTCATTATATAGCAACTGCTGCAGCATCATCAGGATTCCCAACGCAGATTAACAGACTTTCACAAGGATGGCTGCAGAAAAATGGGTTCCACACTCTCATGAGACCCAACTGA 1503 0.5017 MWDLNDSPDWRKDEESEGCSSLKTSMDGDDDKGKRVGSMSNSSSSAVVIEDGSEEEDGERSRTLKKKSSSRIFGFCVNQDESMDTDPPVTRQFFPVEEEEEEAAAVSSGGGRSTAFPRAHWVGVRFCQPEPFSAAAGGRGKSVEVSSQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSESSGNAADHNLDLSLGNSSSKQGSNSQALGNDAHNNGMDHHQMASESSWRNNGGLLRPKLTLLDGQTQLQSSASREMQRFGGYRTTREPQMLNSFAPSHLHPPSFHFPSSSSEGRIGSDLSLSMNDHHHHHQLGPPPPPHQAHYIATAAASSGFPTQINRLSQGWLQKNGFHTLMRPN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00363 500 Gene3D AP2/ERF domain 162 221 IPR036955 GO:0003700|GO:0006355
Accr9g00363 500 Gene3D AP2/ERF domain 254 313 IPR036955 GO:0003700|GO:0006355
Accr9g00363 500 SMART rav1_2 163 225 IPR001471 GO:0003700|GO:0006355
Accr9g00363 500 SMART rav1_2 255 318 IPR001471 GO:0003700|GO:0006355
Accr9g00363 500 ProSiteProfiles AP2/ERF domain profile. 255 312 IPR001471 GO:0003700|GO:0006355
Accr9g00363 500 CDD AP2 254 314 IPR001471 GO:0003700|GO:0006355
Accr9g00363 500 MobiDBLite consensus disorder prediction 426 441 - -
Accr9g00363 500 SUPERFAMILY DNA-binding domain 162 220 IPR016177 GO:0003677
Accr9g00363 500 SUPERFAMILY DNA-binding domain 254 314 IPR016177 GO:0003677
Accr9g00363 500 Pfam AP2 domain 254 303 IPR001471 GO:0003700|GO:0006355
Accr9g00363 500 Pfam AP2 domain 163 211 IPR001471 GO:0003700|GO:0006355
Accr9g00363 500 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 84 400 - -
Accr9g00363 500 MobiDBLite consensus disorder prediction 426 463 - -
Accr9g00363 500 MobiDBLite consensus disorder prediction 134 163 - -
Accr9g00363 500 CDD AP2 163 220 IPR001471 GO:0003700|GO:0006355
Accr9g00363 500 ProSiteProfiles AP2/ERF domain profile. 163 219 IPR001471 GO:0003700|GO:0006355
Accr9g00363 500 FunFam AP2-like ethylene-responsive transcription factor 254 314 - -
Accr9g00363 500 MobiDBLite consensus disorder prediction 1 36 - -
Accr9g00363 500 MobiDBLite consensus disorder prediction 1 68 - -
Accr9g00363 500 MobiDBLite consensus disorder prediction 319 373 - -
Accr9g00363 500 FunFam AP2-like ethylene-responsive transcription factor 162 221 - -
Accr9g00363 500 PRINTS Ethylene responsive element binding protein signature 256 267 IPR001471 GO:0003700|GO:0006355
Accr9g00363 500 PRINTS Ethylene responsive element binding protein signature 294 314 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00363 Accr-Chr9 4064044 4066588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00363 1 499 AP2-EREBP Transcription Factor Family AT4G36920 53.529 7.22e-141 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Accr9g00363 AP2 3.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00363 K09284 - rcu:8260999 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00363 9 4064044 4066588 Accr10g00141 10 2513007 2516045 CCT
Accr9g00363 9 4064044 4066588 Accr9g00363 9 4064044 4066588 ECH