Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00346 ATGCTTGATCCTTCCTCTCCCGCCATGAACGACCAGCTCTCCAGACCCACTTCCATCTTTGGACTCCGATTGTGGGTTGTGCTCGGGGTGTGTGTCGGAGCCGCCATCGTGCTGCTTCTCTTCCTCATTTCTATCTGGCTCGTTTCCAAACGCTCCAAGACTAATCCCACTCACAGACCATCAATCCCAATCGTCTCCAAAGAGATCCACGAGATTAGAATCGACCACCACCACGATTCCAAGCTAAAAGGAACCCGTATCCTATCCGAACCGTCTCCCGAACTCGACCCACTTCCCGGAATTGAACGCCAGGCTCTGCTTCCAGCATCGGAAGAAGAAAATCCATCGGGGATCAACCGAATTCAATTTGAGATTGGGAAGAATCATAGAATTTCGTTCCCTGAACGTGCTCTGGCTCGGTCGTCTTCGCATGGAAGTGGGGAGGTACGGCCCGTCGATCAGGTACCTATGGTGATTCCCGAAGTGTCGCATTTGGGTTGGGGTCACTGGTATACTCTGAGAGAGCTCGAAGATGCGACGAATGGGTTCGCCGACGAGAACGTAATCGGGGAAGGCGGCTACGGAATTGTTTACCATGGTATTCTGAAGGACAATACTAATGTTGCAGTTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGAAAGAGTTCAAGGTCGAAGTGGAAGCCATAGGACGAGTCCGGCACAAGAATTTAGTAAGGTTGCTGGGATATTGTGCTGAAGGAGCTCATAGAATGCTCGTATATGAGTACGTTGACAATGGGAACTTGGAGCAGTGGCTGCATGGGGATGTTGGGCCTTGCAGTCCTCTGAATTGGGAAATTCGAATGAACATTATTCTTGGAACAGCAAAAGGGCTAGCTTATCTTCACGAGGGGTTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAACATTCTGATCGACAAGCAATGGAATTCAAAGGTGTCAGACTTCGGGCTTGCAAAACTCCTTGGCTCTGATAGTAGCTACATTACCACACGTGTCATGGGCACATTCGGATATGTAGCTCCCGAATATGCAAGTACTGGAATGTTAAATGAAAGAAGTGATGTGTACAGTTTTGGAATTCTCATTATGGAAATAATTACAGGAAGGAATCCAGTTGATTACAGTCGGCCTCCAGAAGAGGTCAATTTAGTCGACTGGCTCAAGAAGATGGTTAGTGACAGGAATGCAGAGGGAGTGTTGGATCCCAAGCTCCCTGAGAAACCAAGTTCGAGGGCACTCAAGCGAGCCCTTCTTGTAGCTTTACGTTGCGCTGATCCTAATGCACAAAAGCGACCTAAAATGGGGCATATCATACATATGCTCGAAGCTGAGGATTCTTCTCACAAAGAGGATCGGAGGGCGAGAAGGGATGCGGAAAATTCAGCTAATGATGAGGATAGATCAAAAGGGGAGGCAACTGTGTCTGGTGATGATGGTAAAGTTTGA 1485 0.4774 MLDPSSPAMNDQLSRPTSIFGLRLWVVLGVCVGAAIVLLLFLISIWLVSKRSKTNPTHRPSIPIVSKEIHEIRIDHHHDSKLKGTRILSEPSPELDPLPGIERQALLPASEEENPSGINRIQFEIGKNHRISFPERALARSSSHGSGEVRPVDQVPMVIPEVSHLGWGHWYTLRELEDATNGFADENVIGEGGYGIVYHGILKDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLNWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPPEEVNLVDWLKKMVSDRNAEGVLDPKLPEKPSSRALKRALLVALRCADPNAQKRPKMGHIIHMLEAEDSSHKEDRRARRDAENSANDEDRSKGEATVSGDDGKV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00346 494 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Accr9g00346 494 ProSiteProfiles Protein kinase domain profile. 183 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00346 494 SUPERFAMILY Protein kinase-like (PK-like) 163 455 IPR011009 -
Accr9g00346 494 Gene3D Phosphorylase Kinase; domain 1 162 258 - -
Accr9g00346 494 Gene3D Transferase(Phosphotransferase) domain 1 259 483 - -
Accr9g00346 494 CDD STKc_IRAK 189 455 - -
Accr9g00346 494 Pfam Protein kinase domain 184 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00346 494 FunFam Probable serine/threonine-protein kinase At1g01540 163 258 - -
Accr9g00346 494 PANTHER OS01G0323000 PROTEIN 8 480 - -
Accr9g00346 494 MobiDBLite consensus disorder prediction 454 494 - -
Accr9g00346 494 Coils Coil 203 223 - -
Accr9g00346 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Accr9g00346 494 FunFam Putative receptor-like serine/threonine-protein kinase 259 469 - -
Accr9g00346 494 SMART serkin_6 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00346 Accr-Chr9 3876463 3879014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00346 164 455 Receptor kinase-like Gene Family AT4G02010 45.608 4.95e-88 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Accr9g00346 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00346 - - qsa:O6P43_024625 799.275