Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00313 ATGTCATCATCATCGAATTCTCCGTGCGCTGCGTGCAAGTGTCTGAGGAGGAAATGCACGCCAGAATGCGTGTTCGCACCGTACTTCCCACCGGACAATCCTCAGAGGTTTGCTTACGTCCACAGGGTATTCGGGGCAAGCAATGTCGCTAAGCTTCTAAATGAGCTCAGCGCTGCCCAGAGAGACGATGCCGTTAAGTCTCTGGCTTACGAAGCGGAGGCCCGTCTCCGGGATCCAGTCTATGGTTGTGTGGGTCTCATCTCCCTTCTCCAGCACCGGCTCCGGCAGATCCAGGTGGAACTCAACAATGCAAAGAAGGAGCTCGCCACGTATATTGGACCTCAGGCTCTTCAGGCCATACCTCCCGCCATTCTAGCACCTTCTGGAATGATCCCTCAGCAACACTCAAGTAACCCATATTCTTCCGCTGGTTATCCCTACAACAGCATGCCACCACCGGTTCCTATGATCAATATTCCGGCCGGTGGTTCTTCTCATGCCGGCCAACTCGTGATTCGTGACCCTTCCCAACCTCATCAGATCTTGGAAGCTCAGCAGTTGGCCTTGGCCGTGGCGGCCAGAGATCAACAAGATATGTTTCGAGGTTGCGAGCAGCAGCAGCAACAAGAGTTTCTGAGATTCAATGGTGGATATGATGTGGGTTCGGTTTCTGGGAGTGGATTCAACAATCACATTTCTTCAACTGCTGCTCCCACCGAGATGTCTCCTTCCTTGGCTCTTGGCTCCTTCGACAGCCCTTACGGCGGTCAGATGCAACCCCCGCAGGCCGAACAACACCACCACCAACTTCAAGCTCAGCTAATGCTTTCCCCCCAGCAGCCGCAACCACAGCAACAAAGCCAGCAGTCACAGCAACCCCACCACCAGCAGCAACCGTCAGAAAGCGAGGAGGGTAGGAGTGGCATCTGCCTTTCTTGTTGA 942 0.5425 MSSSSNSPCAACKCLRRKCTPECVFAPYFPPDNPQRFAYVHRVFGASNVAKLLNELSAAQRDDAVKSLAYEAEARLRDPVYGCVGLISLLQHRLRQIQVELNNAKKELATYIGPQALQAIPPAILAPSGMIPQQHSSNPYSSAGYPYNSMPPPVPMINIPAGGSSHAGQLVIRDPSQPHQILEAQQLALAVAARDQQDMFRGCEQQQQQEFLRFNGGYDVGSVSGSGFNNHISSTAAPTEMSPSLALGSFDSPYGGQMQPPQAEQHHHQLQAQLMLSPQQPQPQQQSQQSQQPHHQQQPSESEEGRSGICLSC 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00313 313 Coils Coil 87 107 - -
Accr9g00313 313 MobiDBLite consensus disorder prediction 234 313 - -
Accr9g00313 313 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 297 - -
Accr9g00313 313 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Accr9g00313 313 MobiDBLite consensus disorder prediction 255 307 - -
Accr9g00313 313 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00313 Accr-Chr9 3543208 3544149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00313 3 253 AS2 family AT5G66870 52.593 2.78e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr9g00313 LOB 5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00313 - - qsa:O6P43_033796 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00313 9 3543208 3544149 Accr9g00313 9 3543208 3544149 ECH