Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00301 ATGGTCGTCGACGCCCTTCAACTTCCTCGAGATTCTCTCCCCGATCCTCCCCCTCTCCCTCCCAAGCCCCACCGTTCCGCTGCTTCCGCCTCCATGGAGGCGCATTTTAGAGGCGTCCGTAAGCGTCCCTGGGGCCGATTCGCCGCCGAGATCAGCGATCCCTGGAAGAAGACGCGCAAATGGCTTGGCACCTTTGATGCCGCTTAG 207 0.6184 MVVDALQLPRDSLPDPPPLPPKPHRSAASASMEAHFRGVRKRPWGRFAAEISDPWKKTRKWLGTFDAA 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00301 68 PRINTS Ethylene responsive element binding protein signature 58 68 IPR001471 GO:0003700|GO:0006355
Accr9g00301 68 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Accr9g00301 68 ProSiteProfiles AP2/ERF domain profile. 35 68 IPR001471 GO:0003700|GO:0006355
Accr9g00301 68 SMART rav1_2 35 68 IPR001471 GO:0003700|GO:0006355
Accr9g00301 68 Gene3D AP2/ERF domain 34 68 IPR036955 GO:0003700|GO:0006355
Accr9g00301 68 SUPERFAMILY DNA-binding domain 35 67 IPR016177 GO:0003677
Accr9g00301 68 MobiDBLite consensus disorder prediction 1 35 - -
Accr9g00301 68 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 27 68 - -
Accr9g00301 68 Pfam AP2 domain 35 66 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00301 Accr-Chr9 3424749 3424955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00301 26 67 AP2-EREBP Transcription Factor Family AT1G28360 69.048 9.05e-18 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr9g00301 AP2 2.9e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00301 K09286 - qsa:O6P43_006945 88.1965