Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr9g00288 | ATGTCATTTTCTCTGTTCTCCACGCCACAGCAACAATCGCCCTTTCAGCCCCAGCAGCAGCAGCAACATAGCAGTTTGTTCCTTCCGCAGCAGCAGCAACCGCAATTGCAACTCCAACCGCAACCGCAACCGCCGCCGCCGCCGCAGCAACTATTTCTTTTCACTACCGATAAAACTCCCGCTAATTATAGTTCCAAGTGGGCAGATCTTCATCCTGATTCTCAGAAGTTTCTCCTTGAGATCGAGGAGCGGATATTGGAGTATAGGGATGAGAGCCAGAGACTGGATCAGTGTCATCGTCTCTATGATTCTTCAATTTCAAACGAAGGGTTTGAGCTTGATGCAAGCCACATTGTTCAGGAACTTGGGGGAATCAGCACTGCCATGGAACGACAGAAAACTTTGTTGCAGGAATTGATGTTTGTCGTTAAGGATATGTTACGCAACACAGAGGTTGCTATTCGTTCTTTTATGATGTTACGTCCAAGGTTCCTTCATCCTAGTGGAGGGGGCGCTTCAAGCGCCACAGCTCCTTTGCAGACTCCTGGAACCACTGTAACACCTAGTTCAAGTAGCCAACCGATAACTACAACGATTGTGCCTGTTTTTGATTTTTATTATGGGCTTCCAAAGAAACCATCGCCATTTTTACAGCAATCAGTCTTAAGATTTGAAAAGTATCTAGGTGAATGCCGTCAATGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTAGACTCTGAGAAAAATGGTTCTAATAACAGATCCTCATTATTGGAATCTCTTCCCAAAGTCTTGACAAATGTGCATGACTTTTTTGTTCATGTTGCTGCAAAGGCGGAAAGTATTCATCAGTACATTGAATCTATGAAATCAGCTTACCTAGCTGATCAGCGTCGTTGGGGAGAGGTGAATGATCCATTTTTAGAGGCTGATCGGCGAGAAACAGCAAGACAGGAAGCAGCCTCAAAAAGAGTTCATCCAACACTACACTTGCCTGCAAATACACAGCCATCAACACAAGTTGCTGGTTTGTTTTCCAGCTCAGGAACTCAAGGGACGTTGACTGCTTCACAGACATCTGCAACAACCACGTCATCTTCATCAGGAAGTGGCCTTTCACTTTTTAGCACACCATCTTCTGTTCCACCTTCCTCTATGCCATCTATGTTTACAACACCAACGACTTCTGCTCCAGCACCCTCTTTGTTCGTTTCCTCTAGCGCTACACCCCAACCATTAGCTTTTGGTTCTTCATCTTCCTTATTTGCTCCTTCTTCTTCTCCCTCTCTTTTCAGTAGTTCCGCTTCACCATTTGGTGCAAGTACTGGAGGTTTACTTTTTTCAACTCCATTTGCTTCAGGCCCTGCAATAGGATCAGGGGCGAGCTTTGGGGCTGCATCGAAATCATCAAGGCCAAAATCCAGAACTGCTCGTCGAGGATAA | 1443 | 0.4553 | MSFSLFSTPQQQSPFQPQQQQQHSSLFLPQQQQPQLQLQPQPQPPPPPQQLFLFTTDKTPANYSSKWADLHPDSQKFLLEIEERILEYRDESQRLDQCHRLYDSSISNEGFELDASHIVQELGGISTAMERQKTLLQELMFVVKDMLRNTEVAIRSFMMLRPRFLHPSGGGASSATAPLQTPGTTVTPSSSSQPITTTIVPVFDFYYGLPKKPSPFLQQSVLRFEKYLGECRQWIEELEQLLLLDSEKNGSNNRSSLLESLPKVLTNVHDFFVHVAAKAESIHQYIESMKSAYLADQRRWGEVNDPFLEADRRETARQEAASKRVHPTLHLPANTQPSTQVAGLFSSSGTQGTLTASQTSATTTSSSSGSGLSLFSTPSSVPPSSMPSMFTTPTTSAPAPSLFVSSSATPQPLAFGSSSSLFAPSSSPSLFSSSASPFGASTGGLLFSTPFASGPAIGSGASFGAASKSSRPKSRTARRG | 480 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr9g00288 | 480 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Accr9g00288 | 480 | MobiDBLite | consensus disorder prediction | 329 | 396 | - | - | |
| Accr9g00288 | 480 | Gene3D | - | 212 | 302 | - | - | |
| Accr9g00288 | 480 | MobiDBLite | consensus disorder prediction | 171 | 193 | - | - | |
| Accr9g00288 | 480 | PANTHER | NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 | 5 | 467 | IPR024882 | GO:0005643|GO:0006913|GO:0008139|GO:0017056 | |
| Accr9g00288 | 480 | MobiDBLite | consensus disorder prediction | 461 | 480 | - | - | |
| Accr9g00288 | 480 | MobiDBLite | consensus disorder prediction | 173 | 193 | - | - | |
| Accr9g00288 | 480 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Accr9g00288 | 480 | MobiDBLite | consensus disorder prediction | 312 | 396 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr9g00288 | 51 | 479 | NAC Transcription Factor Family | AT4G37130 | 63.678 | 0.0 | 520 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr9g00288 | K14307 | - | qsu:112038101 | 524.628 |