Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00281 ATGAGGCAAACTGGAGAAAGTTGCAGAGCATTGGAAAGACATATATATTGGACAGAATTCGCTCCCAATAGACACCAATTTTTCAAGCTAATGATGGGAAATTTCAGGAACGAGCTGCGAATCCCAACGAAGTTTGTGAATCATTTTTCGGAGAAACTCCTGGGTATTGTAAGACTTATAGGGCCGAGTAGACATGTGTGGGATGTTAAAGATGAAGAAACGGATGATGATGTCGTTTTTCAGATTGGTTGGGAAAAATTCGTGCAGGACCACAGTTTAGCAGAAAGAGATTTTGTTGTTTTCCAATACATTGGATTCTCTTCTTTCAATGTCTCCATTTTCGATCAAACAGGATGTGAAAGAGAAGGTGCTTTTTTCGTCAAAAAGCACATTTTGTGCACTAGAAATGCTTGCTTTCTTGAAGATGAAGAGGAGGAAATCCTACAAATTACTGATGGGGAAGAAATGAAGGGAAAGGCAAAGAAACAGAAACTAAAAGGTAGGGATGCTGCGATTGGTAAGGTGCGGGAAAGAAACCTGAGAAGCAAAACTCCTATGCTCGTTAGAACCAGCTTCAAGGCCAACAATTCAAACACGGACGTTTCTGGTGCTAGGAAAGAAGACCTGCGGCCAAAGAAAAGGTCAAAATCCGTCCCTCATCAACTTAAAGCGAGCTAA 678 0.4115 MRQTGESCRALERHIYWTEFAPNRHQFFKLMMGNFRNELRIPTKFVNHFSEKLLGIVRLIGPSRHVWDVKDEETDDDVVFQIGWEKFVQDHSLAERDFVVFQYIGFSSFNVSIFDQTGCEREGAFFVKKHILCTRNACFLEDEEEEILQITDGEEMKGKAKKQKLKGRDAAIGKVRERNLRSKTPMLVRTSFKANNSNTDVSGARKEDLRPKKRSKSVPHQLKAS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00281 225 ProSiteProfiles B3 DNA-binding domain profile. 24 117 IPR003340 GO:0003677
Accr9g00281 225 CDD B3_DNA 27 115 IPR003340 GO:0003677
Accr9g00281 225 SUPERFAMILY DNA-binding pseudobarrel domain 22 121 IPR015300 -
Accr9g00281 225 SMART B3_2 27 117 IPR003340 GO:0003677
Accr9g00281 225 Gene3D - 20 119 IPR015300 -
Accr9g00281 225 PANTHER B3 DOMAIN-CONTAINING 22 173 - -
Accr9g00281 225 MobiDBLite consensus disorder prediction 182 225 - -
Accr9g00281 225 Pfam B3 DNA binding domain 27 116 IPR003340 GO:0003677
Accr9g00281 225 MobiDBLite consensus disorder prediction 184 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00281 Accr-Chr9 3147163 3147967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00281 1 129 REM Transcription Factor Family AT4G33280 42.748 2.24e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr9g00281 B3 5.4e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00281 - - qsa:O6P43_033778 174.866