Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00277 ATGTTTCATTACGAGAAAAGCTTCTCTATTCTTCTTATACTCTTCATGATTTACTCAACAAAAGCCGAAAACAAAAGCACATGCCAGACAAAGTGTGGAGAAAATTCATTGACGTATCCTTTTGGGTTCTCTGAAGGTTGCCAAATCCAATTATACTGTAGCCCCACCAATAACCAAATGCAAATTGGGGAGTTTTTGGTTCAGGACGTGACATCTAGCAGCATATTCATCCATATTCCTGCAAAATGCAACCGTACCTTGGAATCCATTGAGCCCCTTTTCACTTCCAAGTTTGCTCCTGTAGAGAGCAACAGCCTCCTTGTGCAAAATTGTACATCTGCGCTTGGTGGCTGTGTTATACCCACCTCAAGCTTTACGAGCAATCAGATAAAGTTGGATGGCTGCGATAATAGAAGTGATAATATAAGTTGCTTAACGCAAAGCCAAGGCCAGGAAGCTTTTGATGTTATGAAATTCGAGGATGTGATCCAGAGTGGTTGCAAATACTTGTTCTCGTCTTTGGCCATTGACCAGAGGAAGGAGGACCCAGAGGTTTTGCTCCAGTTTCAGACATTAGAGCTGGGGTGGTGGCTTGAAGGCCCATGCCAATGCTCTCCTAATGCCACCTGTACAAATGTTACTGTCGCCGCCGGAAAGTTCGGGTTCCGGTGTCAATGTCCTCCAGGTTATCACGGAGATGGTTTCTTGCATGGCACCGGTTGCCGGAGATCAAAAGGATGTGGAAGAGAAGCTAAAGTCGGGGTTCTCGTTGGAGGGATCACTGCTGGAGCTTTGATAGTGGCAATTCTGTGTCTCATTGGTTATTATGTACGACGTCGTTCCTATTGTTTGAAGAAACAACGGACTGTAAAGCGCCTATTGCGTGAAGCTGCAGGCAGCTCTACCGTTCCTTTATATCCTTACAAAGAAATAGAGAGAGCCACTAATTTTTTCTCAGAGAAACAGAGGCTTGGAACTGGAGCTTTTGGTACAGTTTATTCAGGAAAACTCCATAATGATGATTTGGTTGCCATAAAGAAAATAAGACAGAGAGACCCCAATAGTGTTGACCAAGTCATGAATGAAATCAAGCTCCTTTCTTCTGTGAGTCACCAAAATTTAGTTCGTCTTCTGGGTTGCTGCATTGAAGAGGATGAACAAATTCTTGTTTATGAGTTTATGCCCAATGGACCTTTGTCTCAGCATTTACAGAGAGAGAATGGTAAAGGGCTTCCATGGACAATTCGGCTCACTATCGCATCTGAAACTGCTAATGCCATAGCTTATCTGCATTCTGCCATTGATCCTCCAATCTATCACAGAGACATAAAATCCAGCAATATTTTGCTGGATTACAACTTCAACTCAAAAGTTGCAGACTTTGGGCTTTCAAGGCTTGGCTTGACCGAAATATCACACATCTCAACCGCCCCTCAAGGGACACCAGGCTACGTGGATCCTCAATATCACCAAAACTACCATCTTTCTGATAAAAGTGATGTTTACAGTTTCGGAGTTGTTTTAATAGAGATAATAACAGCCCTCAAAGTGGTTGATTTTGGTCGACCTCATAATGAGGTTAATTTAGCAGCACTCGCAGTTGATAGAATCAGGAGGGGCTGTGTGGACGAGATCATAGATCCCTTCTTAGAGCCACACGGAGATGCTTGGACACTCTATTCTATTCACAAAGTGGCTGAACTTGCATTCAGATGCTTAGCTTTTCATGGCGACATGAGGCCTACGATGATGGAAGTGGCAGAGGAGCTAGACCACATCAGATGCAGTGGATGGGCAATAATGGAGGAAACCATAGCATCATCGGTCGGGTCGGCACGTTCATCATTACCAAATGAAGCTGAGAAATCCTCTAGTGATGTTCAACTTGATAAAGAACAAGTAGACAGTGAGAGATTGATTGTTTCAGAGAGGGCAGAGGTGAGGGATATCTCCCCTGTATCAGTGCATGATACTTGGTCAAGTGGACGTAGCTCGCCTCCAAGCAATAGCTTGTTGGGAAATGCACCTCAATGA 2034 0.439 MFHYEKSFSILLILFMIYSTKAENKSTCQTKCGENSLTYPFGFSEGCQIQLYCSPTNNQMQIGEFLVQDVTSSSIFIHIPAKCNRTLESIEPLFTSKFAPVESNSLLVQNCTSALGGCVIPTSSFTSNQIKLDGCDNRSDNISCLTQSQGQEAFDVMKFEDVIQSGCKYLFSSLAIDQRKEDPEVLLQFQTLELGWWLEGPCQCSPNATCTNVTVAAGKFGFRCQCPPGYHGDGFLHGTGCRRSKGCGREAKVGVLVGGITAGALIVAILCLIGYYVRRRSYCLKKQRTVKRLLREAAGSSTVPLYPYKEIERATNFFSEKQRLGTGAFGTVYSGKLHNDDLVAIKKIRQRDPNSVDQVMNEIKLLSSVSHQNLVRLLGCCIEEDEQILVYEFMPNGPLSQHLQRENGKGLPWTIRLTIASETANAIAYLHSAIDPPIYHRDIKSSNILLDYNFNSKVADFGLSRLGLTEISHISTAPQGTPGYVDPQYHQNYHLSDKSDVYSFGVVLIEIITALKVVDFGRPHNEVNLAALAVDRIRRGCVDEIIDPFLEPHGDAWTLYSIHKVAELAFRCLAFHGDMRPTMMEVAEELDHIRCSGWAIMEETIASSVGSARSSLPNEAEKSSSDVQLDKEQVDSERLIVSERAEVRDISPVSVHDTWSSGRSSPPSNSLLGNAPQ 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00277 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Accr9g00277 677 ProSitePatterns Protein kinases ATP-binding region signature. 324 347 IPR017441 GO:0005524
Accr9g00277 677 Gene3D Laminin 202 237 - -
Accr9g00277 677 FunFam Wall-associated receptor kinase-like 14 285 393 - -
Accr9g00277 677 SMART serkin_6 318 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00277 677 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 661 IPR044652 GO:0004672
Accr9g00277 677 ProSiteProfiles Protein kinase domain profile. 318 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00277 677 Gene3D Transferase(Phosphotransferase) domain 1 394 604 - -
Accr9g00277 677 FunFam Wall-associated receptor kinase-like 20 394 603 - -
Accr9g00277 677 CDD EGF_CA 204 233 - -
Accr9g00277 677 MobiDBLite consensus disorder prediction 654 677 - -
Accr9g00277 677 Gene3D Phosphorylase Kinase; domain 1 279 393 - -
Accr9g00277 677 MobiDBLite consensus disorder prediction 611 635 - -
Accr9g00277 677 ProSiteProfiles EGF-like domain profile. 198 236 IPR000742 -
Accr9g00277 677 SUPERFAMILY Protein kinase-like (PK-like) 298 590 IPR011009 -
Accr9g00277 677 MobiDBLite consensus disorder prediction 652 677 - -
Accr9g00277 677 Pfam Protein kinase domain 318 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00277 Accr-Chr9 3080961 3084136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00277 28 677 Receptor kinase-like Gene Family AT2G23450 54.844 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr9g00277 Pkinase 4.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00277 - - qsa:O6P43_024659 885.174