Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00262 ATGTCCCAAGATTATCATCAAGCAGGAATCTTCAGCTTTCCGAATGGATTCGAGAGATCCACTGTAACTCAGCAACCCCAGATCCGGAGAGACAAAGTGAGGGTGCAAGGCTTCGACCCACCACCATCGTTGGTAGGTATTGAGGAAGAGGAATCCGGAGGCCTTCCGGTGTACGAAACCGCCGGGATGTTATCAGAGATGTTTAGTTTCCCACCCACCGGCGCCACATCTTCAGAATTATTGGAACAACAACCCTTGACGGCGACGTATCGATCGTTCAGCAGGCCACAGCAGGCTTCTGCGATGAGCAGTAGTGACTGGTACGGAGACCAACAAGGCATGTTAACTGGCTTGGGAGATTCCAAGAATCACCTCCGTCCTCATCAGCAGCGTCAGATTTCAGGCATTAATGCGGCAGCCATGCAGCTTTTTCTCATGAACCCTCAAACCAGATCGCCTTCTCCTCCTCCTCACAATCCTTCCACTACTTCTTCCACCCTCAACATGTTGCTCCCCAATAATCCTCCCTCTTCTCTCCAAGAATTCCCTGGAACGGGAGGACCTTTTGGTCAATTCACCTGGCTTCCATTTTCTGAAGCAGGTTCTCAAGAAGTTGCAACCAACACCAACCAGAATCCAGGTCAAATGGGAGGGGTTGTGGAAGGCCAAGGTCTTTCTTTATCATTGTCCTCTTCATTAGAAGCAGCAAAAGCCGAGGAACTGAGGATGGGCGGCGATGGCGGCTTTCTTAATTATTACGGAGGGTCCTATCCGTACAAGAATTTGGGTGGAGGTCAAGGTCAAACTCACACATTGCATTTACAGGGAGTAGCGCAGAATAACCACCAAGTCCATGGTGGTTTCGGGTCATCGTTAGGGATTGCGAATGTGCTGAGGAACTCCAAGTATGTGAGGCCTGCTAAAGAATTGCTTGAAGAATTCTGCAACATTGGGAGGGGACAGTTCAAGAAGAACAAATTCACCCGCCACAACTCCAACCCTAATTCCAATTCCGGTGCTGTTGGTGCCGCCGCTTCTTCATCTTCAACAAAAGATCCTCCTCCTTTGTCCGCCGCCGACAGGATGGAGCATCAGAGAAGGAAGGTCAAACTACTATCCATGCTTGACGAGGTGGACCGAAGATACAGTCACTACTGCGAGCAAATGCAAATGGTGGTGAACTCATTTGACTTGGTGATGGGTTTTGGGGCGGCGGTGCCATACACGGCGTTGGCACAGAAAGCAATGTCAAGACATTTCCGGTGCCTGAAGGAGGCCATATCAGCACAACTGAAACACAGTTGCGAGCTGCTGGGTGAGAAAGATGGCTTGGGTTCGTCGGGTTTGACCAAAGGTGAGACCCCAAGGTTGAAGTTGCTTGAACAAAGCCTGAGACAGCAGAGAGCCTTCCACCAGATGGGCATGATGGAGCAGGAGGCTTGGAGACCCCAGCGAGGCCTTCCTGAACGTTCTGTCAACATTTTGAGAGCCTGGCTTTTCGAACATTTCCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGCCTATCGAGAAATCAGGTATCAAACTGGTTCATTAACGCAAGGGTAAGGTTGTGGAAACCCATGGTAGAGGACATGTATCAGCAAGAGCTCAGAGAAGCTGATGAGGATGCAGAAGAGAGAGAAATGAACCAAAGTAACAACAGCAACAATAGTGGCAACATGGAACAAACTCCAACGCCTACCACCACCACCACTTCAACGGCGTCGGCACCACCTACAACGCCACCAGCCAAAAGATCCGACGTCGTCAATGCCTACGAAAGAGACCCCTCATCACTCGTTGCAATCAATAGACAAGCCCTATCGGAAAACCAAGAAAAGCAACGGTCGTCCACCGCCACCGCATCTGAGGTAGCGCCGCCCGTTTCCCAATGTTTCCGATCAGACCTGCCTCTGCACGGTCATGATGACACGTGTCGGCATGGCAGTGTGGTTGCAGAAGACTGTGGGACCGCCTCGGCCACTGCTAACAATATTGGATCTACTCTCATTAGGTTCGGGACCACCACCGGCGATGTGTCGCTCACCCTAGGGCTACGCCACGCCGGGAACATCCCTGACACCTCTCCTTTCTCAGTTAGAGATTTTGGAGGCATCTGA 2163 0.5113 MSQDYHQAGIFSFPNGFERSTVTQQPQIRRDKVRVQGFDPPPSLVGIEEEESGGLPVYETAGMLSEMFSFPPTGATSSELLEQQPLTATYRSFSRPQQASAMSSSDWYGDQQGMLTGLGDSKNHLRPHQQRQISGINAAAMQLFLMNPQTRSPSPPPHNPSTTSSTLNMLLPNNPPSSLQEFPGTGGPFGQFTWLPFSEAGSQEVATNTNQNPGQMGGVVEGQGLSLSLSSSLEAAKAEELRMGGDGGFLNYYGGSYPYKNLGGGQGQTHTLHLQGVAQNNHQVHGGFGSSLGIANVLRNSKYVRPAKELLEEFCNIGRGQFKKNKFTRHNSNPNSNSGAVGAAASSSSTKDPPPLSAADRMEHQRRKVKLLSMLDEVDRRYSHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKEAISAQLKHSCELLGEKDGLGSSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELREADEDAEEREMNQSNNSNNSGNMEQTPTPTTTTTSTASAPPTTPPAKRSDVVNAYERDPSSLVAINRQALSENQEKQRSSTATASEVAPPVSQCFRSDLPLHGHDDTCRHGSVVAEDCGTASATANNIGSTLIRFGTTTGDVSLTLGLRHAGNIPDTSPFSVRDFGGI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00262 720 Coils Coil 544 564 - -
Accr9g00262 720 FunFam BEL1-like homeodomain protein 4 484 546 - -
Accr9g00262 720 Pfam Homeobox KN domain 498 537 IPR008422 GO:0003677|GO:0006355
Accr9g00262 720 SUPERFAMILY Homeodomain-like 483 548 IPR009057 -
Accr9g00262 720 Gene3D - 484 546 - -
Accr9g00262 720 MobiDBLite consensus disorder prediction 564 595 - -
Accr9g00262 720 Pfam Associated with HOX 297 428 IPR006563 -
Accr9g00262 720 MobiDBLite consensus disorder prediction 202 222 - -
Accr9g00262 720 MobiDBLite consensus disorder prediction 147 185 - -
Accr9g00262 720 SMART prehox3 292 429 IPR006563 -
Accr9g00262 720 CDD homeodomain 481 542 IPR001356 GO:0003677
Accr9g00262 720 MobiDBLite consensus disorder prediction 202 217 - -
Accr9g00262 720 MobiDBLite consensus disorder prediction 553 608 - -
Accr9g00262 720 MobiDBLite consensus disorder prediction 325 363 - -
Accr9g00262 720 ProSiteProfiles 'Homeobox' domain profile. 478 541 IPR001356 GO:0003677
Accr9g00262 720 SMART HOX_1 481 545 IPR001356 GO:0003677
Accr9g00262 720 MobiDBLite consensus disorder prediction 327 354 - -
Accr9g00262 720 MobiDBLite consensus disorder prediction 161 181 - -
Accr9g00262 720 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 166 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00262 Accr-Chr9 2925021 2930527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00262 1 528 Homeobox Transcription Factor Family AT4G36870 50.859 1.68e-142 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Accr9g00262 POX 4.3e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00262 - - jre:108995343 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00262 9 2925021 2930527 Accr10g00070 10 1156145 1162781 CCT
Accr9g00262 9 2925021 2930527 Accr9g00262 9 2925021 2930527 ECH
Accr10g00070 10 1156145 1162781 Accr9g00262 9 2925021 2930527 ECH