Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00260 ATGGACTCGGCGGAGTTGACTGTAGAACAAGTTCTGAGGAGGGATATCCCATGGGAGGCGTATATGAGCACCAAGTTGATCTCAGGCACAAGCCTTCAGCTCTTAAGGCGTTATGATCACAAATCACAAAGTCAAAGGGCACAGTTGTTGGATGATGATGGTCCAGCTTATGTACGTGTGTTTGTTCATGTTTTGCGTGATATACATAAAGATGAGACAGTGGAATACGTTCTGGCCTTATTAGATGAAATGCTTACAGCAAACCCAAAAAGAGCGAGGCTGTTTCATGATAAGTCCCTTGCAGATGAGGACGCCTATGAACCTTTCTTAAGATTGCTTTGGAGAGGAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATAGTTAGTGCGAGGCCAAAAAATCAGGACAGCAGTTTTGCAAATGGAGAAGCATCAAAATCAAAGAAGCCCTTTATTACCATTGATGATGTTTTAAAAGAATTGGTAAAATGGCTTTGTGAACAGCTGAGGAACCCTACTCATCCTAATCGTGGTGTGCCAACTGCTGTCAACTGTTTATCAACTCTTCTTAAGGAACCTATTGTTAGGTCTTCCTTTGTTCAGGCGGGTGGAGTCAAGTTACTTGTACCTTTGATTTCTCCTGCATCCACCCAACAGTCTATTCAGCTCCTATATGAAACATGTCTCTGCATCTGGCTCTTATCCTATTATGAGCCAGCAGTTGAATATCTGGCTACTTCAAGAACCCTTCCCCGACTTATTGATGTTGTTAAGAGTTCTACTAAAGAGAAGGTGGTCAGAGTAGTAATCTTAACTCTCAAGAACTTGATGCCAAAAGGGACATTGGGTGCTCAAATGGTTGACCTCCAGCTGCCACAAGTTGTTCAGAGTTTGAAAGCACAGGCATGGAGTGATGAGGACTTGTTGGAGGCGTTGAATTACCTGGAAGAAGGGCTTAAGGATAACATTAAGAAACTTAGTTCCTATGACAAATATAAGCAAGAAGTCCTCCTTGGCAACCTGGATTGGTCTCCTATGCACAAAGATCCTATATTTTGGCGAGAAAATATTACCAACTTTGAAGAAAATGACTTTCAGATTTTAAGGGTCCTACTAACAATTTTAGACACGTCTGGTGATCCAAGAAGTCTGGCTGTGGCATGCTTCGACCTTTCGCAATTCGTCCAACATCATCCTGCTGGGAGAATCATAGTGACAGACCTCAAGGCCAAGGAACGGGTGATGAAACTAATGAATCATGAGAACGCTGAAGTCACTAAAAATGCACTGCTCTGCATCCAACGGCTCTTCTTGGGTGCAAAGTATGCAAGCTTTTTGCAGGCCTAG 1359 0.4253 MDSAELTVEQVLRRDIPWEAYMSTKLISGTSLQLLRRYDHKSQSQRAQLLDDDGPAYVRVFVHVLRDIHKDETVEYVLALLDEMLTANPKRARLFHDKSLADEDAYEPFLRLLWRGNWFIQEKSCKILALIVSARPKNQDSSFANGEASKSKKPFITIDDVLKELVKWLCEQLRNPTHPNRGVPTAVNCLSTLLKEPIVRSSFVQAGGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAVEYLATSRTLPRLIDVVKSSTKEKVVRVVILTLKNLMPKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNYLEEGLKDNIKKLSSYDKYKQEVLLGNLDWSPMHKDPIFWRENITNFEENDFQILRVLLTILDTSGDPRSLAVACFDLSQFVQHHPAGRIIVTDLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00260 452 FunFam V-type proton ATPase subunit H 343 444 - -
Accr9g00260 452 PIRSF V-ATP_synth_H 2 451 IPR004908 GO:0000221|GO:0046961|GO:1902600
Accr9g00260 452 Pfam V-ATPase subunit H 329 441 IPR011987 GO:0000221|GO:1902600
Accr9g00260 452 Gene3D - 344 444 IPR038497 -
Accr9g00260 452 Gene3D - 5 331 IPR011989 -
Accr9g00260 452 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 2 451 IPR004908 GO:0000221|GO:0046961|GO:1902600
Accr9g00260 452 SUPERFAMILY ARM repeat 8 442 IPR016024 -
Accr9g00260 452 CDD VATPase_H 2 446 - -
Accr9g00260 452 SMART arm_5 42 86 IPR000225 GO:0005515
Accr9g00260 452 SMART arm_5 195 240 IPR000225 GO:0005515
Accr9g00260 452 SMART arm_5 402 442 IPR000225 GO:0005515
Accr9g00260 452 SMART arm_5 241 282 IPR000225 GO:0005515
Accr9g00260 452 Pfam V-ATPase subunit H 8 323 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00260 Accr-Chr9 2894380 2900566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00260 1 452 Primary Pumps ATPases(2) AT3G42050 78.097 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00260 K02144 - gmx:100788723 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00260 9 2894380 2900566 Accr9g00260 9 2894380 2900566 ECH