Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00259 ATGCGTCTCTTTCTCCTCATCCCAATCCTCTGTTTCGCTCTGTTCTGCAGTTTCCCTCTGATTCTGGGGCAGCAACCTTATATTGGTTTGGGCACAAATGCCTGTCCTAGAAAGGGCAATTCAAAATCTATTCGCGGTTACACTTGTAATGGCGTTGCTCATAGCTGCCAAGCTTACCTCACCTTCAGATCTCAACCCCTTTACTACTCCGTTTCAACAATTTCTGCTCTGCTTGGCTCTGACCCATCTCAACTTTCTGAAATCAACTCTGTTTCTCTGAATGCCACCTTTGCGACAAATCAATTGGTGATCGTTCCCGTCAACTGTTCCTGTGCAAGTGCTTATTATCAGACTAACACTTCCTACACTGTCCACAGCACAGAAAACTATTTGTTGATTGCTAACAACACTTTCCAAGGCCTCTCGACCTGTCAAGCTATCATGAATGAAAACGACATTCCTGGAAATTTATTTGCCGGTAGAAAACTTACAGTCCCTCTTAGATGCGCTTGTCCCACAAAGAATCAAACTGACAAAGGCTTCAAGTACTTACTGAGTTACTTGGTCACCTGGGGTGATTCTGTTTCCCTCATCAGTAAAAAATTTGGTGCACTCACTGATCTCACTCTGGAATCAAATAGTCTTTCTGGTCAAGATAAAATTTATCCCTTTACCACAATTTTAGTGCCTCTTCAACATAAACCCAACATCTCTAAAATCGTTGTGTCTCCTCCACCACCATCTCCATCACCCCCACCTTCATCTTCTACATCACGTGGCAGCTCAAATAAGACATGGATATATGCAGTTGTTGGAGCTGTCGGAGGTATTGTCTTGATATCACTCCTTCTCCTCGGTATACTGGTCTTCCGTAAACAGTATCCTAGGAGTCAAAAGAAAGATGATCCTGCAACAGTGTCTAAGAGTTTCGAGGCACCAGAGAAACCAGAAGGAAAAAAGGTCGGGGAAGGGTCGGAAACATTGTCGGAGATAATATCCGGCATAGCCCAGTCTTTCAAAGTGTACGAATTTAAGGAACTAAAACGTGCAACGGATAATTTTAGTTCAAGCAGCTGCATCAAAGGGAGTGTTTATCGCGGTATGATTAATGGTGATTTGGCCGCTATTAAAAAGATGGAGGGCGGTGTGTCGAAAGAGATAGCAATTCTCAACAAAGTCAACCACTCTAATGTAATACGTCTGTCTGGGGTCAGCTTCAACGAGGGCCATTGGTTTCTGGTTTATGAGTATGCCACTAATGGATCCTTGACTGATTGGATCTACGTCAACAACTCGAACGGAAAATTTTTGACTTGGAGTCAGAGAATGCAAATAGCATTAGATGTGGCCACAGGAGTTGACTATCTCCATAGTTTCACTTCACCTCCTCTTATCCACAAGGATCTCAAGACTGATAATATCCTTCTGAATAATGATTTGAGGGCCAAAATTGCTAACTTGGGGCTTGCAAGATCAGCAGAAGGAGAGGATGATCAATTCCCCACGACGAGGCATATTGTTGGAACAAGAGGCTATATGGCTCCTGAGTATCTAGAAAATGGCATAGTTTCTACAAAACAAGATGTGTATGCATTTGGGGTTGTGATGCTGGAAATATTAAGTGGAAAAGAGGTTGATGCTATTCATTCAGAAGATAAAGGGAGTTTGTCGGATGTTTTAAGTGTTATTCTTGATGGGGACAGTGAAGACGAGGAGTTGAGGGATTTTATGGATCCTTTCCTGATTGGGAAGTTTCCATTGGAACTTGCTGTGTTTGTGGTTAGAATGATTGATAATTGCTTGAGGAAAGATCCAGCCAGTCGCCCTGCTATGCATGAAGTAGTGTCGTCTCTCTCTGTAATGTTGGACTCTTCATTGGCCTGGGAAAGATCAGTGACCGTCTCAGGAGAACAGAACTTTAGCAGAGCTCTTGATTTTACCAAGCCTGAACCCAAGACACTTGGCACCATGTTCTGA 1977 0.431 MRLFLLIPILCFALFCSFPLILGQQPYIGLGTNACPRKGNSKSIRGYTCNGVAHSCQAYLTFRSQPLYYSVSTISALLGSDPSQLSEINSVSLNATFATNQLVIVPVNCSCASAYYQTNTSYTVHSTENYLLIANNTFQGLSTCQAIMNENDIPGNLFAGRKLTVPLRCACPTKNQTDKGFKYLLSYLVTWGDSVSLISKKFGALTDLTLESNSLSGQDKIYPFTTILVPLQHKPNISKIVVSPPPPSPSPPPSSSTSRGSSNKTWIYAVVGAVGGIVLISLLLLGILVFRKQYPRSQKKDDPATVSKSFEAPEKPEGKKVGEGSETLSEIISGIAQSFKVYEFKELKRATDNFSSSSCIKGSVYRGMINGDLAAIKKMEGGVSKEIAILNKVNHSNVIRLSGVSFNEGHWFLVYEYATNGSLTDWIYVNNSNGKFLTWSQRMQIALDVATGVDYLHSFTSPPLIHKDLKTDNILLNNDLRAKIANLGLARSAEGEDDQFPTTRHIVGTRGYMAPEYLENGIVSTKQDVYAFGVVMLEILSGKEVDAIHSEDKGSLSDVLSVILDGDSEDEELRDFMDPFLIGKFPLELAVFVVRMIDNCLRKDPASRPAMHEVVSSLSVMLDSSLAWERSVTVSGEQNFSRALDFTKPEPKTLGTMF 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00259 658 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 630 - -
Accr9g00259 658 ProSiteProfiles Protein kinase domain profile. 315 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00259 658 SMART serkin_6 342 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00259 658 Gene3D Transferase(Phosphotransferase) domain 1 419 636 - -
Accr9g00259 658 Pfam Protein kinase domain 377 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00259 658 Pfam LysM domain 187 230 IPR018392 -
Accr9g00259 658 ProSiteProfiles LysM domain profile. 185 229 IPR018392 -
Accr9g00259 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Accr9g00259 658 Gene3D Phosphorylase Kinase; domain 1 328 417 - -
Accr9g00259 658 Gene3D LysM domain 185 240 IPR036779 -
Accr9g00259 658 FunFam PTI1-like tyrosine-protein kinase 3 418 632 - -
Accr9g00259 658 MobiDBLite consensus disorder prediction 239 261 - -
Accr9g00259 658 MobiDBLite consensus disorder prediction 240 254 - -
Accr9g00259 658 MobiDBLite consensus disorder prediction 298 324 - -
Accr9g00259 658 SUPERFAMILY Protein kinase-like (PK-like) 337 618 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00259 Accr-Chr9 2890848 2892824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00259 9 631 Receptor kinase-like Gene Family AT2G23770 43.106 9.32e-168 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr9g00259 Pkinase 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00259 - - gmx:100815842 802.357