Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00209 ATGATGCACCGTTGCTGTGGCTCTCATCAGGGGCACGTGATGGGACCGTGTACATGTGGTGTGTTCCACGGCCAAACCACTTCCTTCTCTATGCTCTTCTCCATGCCCAACCACAAATCCTACGGTGGTGACTGCGATAATACGTATTCTTTCGCCTCCACCACTCCTTCCCCTTCTTCCGTTGACTGCACCCTCTCTCTCGGCACCCCCTCCACCCGTTTATGCCAAGACGAAGAAAAACGCCACCGCCATGACCCTCGCTCCGTCTCTAACTTCTGTTGGGATTTATTCCAATCCAAACACACCTCTGAGTCCCACACCAAGTCCGCCCGCAACACCAGTACTAGCAACTCCTCTAACAATGATCCCCTGCTCGCTCGTCGTTGTGCTAACTGTGACACCACTTCCACTCCCCTCTGGAGAAACGGCCCTCGAGGACCCAAGTCGCTATGCAATGCCTGTGGGATTAGGTTCAAGAAGGAAGAGAGGAGGGCAGGTGCGGTGGCCGCCACGACGGCGGCCAACTCAGGCGGCCTTATGGAGTCGGCGCAGATGTTTACCGGACACCATAACGCTTCATGGTATGCGCACTCTCAGAACCAGAAAATGATGGGCAATGAGTTTCGCTTTGTGGATGACGCGGCCGACCGGGACGGCGACTGCGGCGGCATTCCGTTTCTGTCTTGGAGGCTCAACGTTACGGACAGACCGAATCTTGTTCATGATTTTACGAGATGA 738 0.5515 MMHRCCGSHQGHVMGPCTCGVFHGQTTSFSMLFSMPNHKSYGGDCDNTYSFASTTPSPSSVDCTLSLGTPSTRLCQDEEKRHRHDPRSVSNFCWDLFQSKHTSESHTKSARNTSTSNSSNNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAGAVAATTAANSGGLMESAQMFTGHHNASWYAHSQNQKMMGNEFRFVDDAADRDGDCGGIPFLSWRLNVTDRPNLVHDFTR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00209 245 PANTHER GATA TRANSCRIPTION FACTOR 18 11 245 IPR044272 GO:0003700|GO:0009908
Accr9g00209 245 SMART GATA_3 123 175 IPR000679 GO:0006355|GO:0043565
Accr9g00209 245 CDD ZnF_GATA 128 160 IPR000679 GO:0006355|GO:0043565
Accr9g00209 245 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 126 164 - -
Accr9g00209 245 ProSitePatterns GATA-type zinc finger domain. 129 154 IPR000679 GO:0006355|GO:0043565
Accr9g00209 245 Gene3D - 125 202 IPR013088 GO:0006355|GO:0008270
Accr9g00209 245 Pfam GATA zinc finger 129 163 IPR000679 GO:0006355|GO:0043565
Accr9g00209 245 ProSiteProfiles GATA-type zinc finger domain profile. 123 159 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00209 Accr-Chr9 2262736 2263573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00209 6 245 C2C2-Gata Transcription Factor Family AT3G50870 43.197 3.24e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr9g00209 GATA 5.9e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00209 - - gmx:100790571 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00209 9 2262736 2263573 Accr10g00034 10 418916 419788 CCT
Accr9g00209 9 2262736 2263573 Accr9g00209 9 2262736 2263573 ECH