Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00205 ATGGAACTGAGAGGTTTAGAAAAGGAAATAGAGATGCCATTACCAACCACTTCAGGTTATAATCGCTCCAATAGGGACTTGTCTTCTTCTCCAACTCTAGCTTCAACAGCAGGCGAAACGATTAGTGATCATCAACCTCCTCAAAGTTCAGACCACTATCATCATCATCCTCCTTCTCTGCCATCGAACCATCTTCAGCAATTGCAGAGAAACACAAGAGATCCAGATCCGCCGAGCGTAACGGCGATCACACCGATTGCTAGCAGATCAAACCCAAGACCAGCAATTAGGTACAGAGAATGCTTGAAGAATCATGCGGCAAGCATGGGAAGACACGTCGTGGATGGATGCGGCGAGTTCACGCCAAGCGGAGAAGAAGGCACTGCACAATCATTGAGATGTGCTGCTTGTGACTGCCACCGGAATTTCCACCGGAAAGAGACCGACGGTGAGCCTCAAACTAATGTTCTCAATTTCTACGCCTACCCTCCCAGCAAAAGCAATAACGCACAAAGTAGGATTCTTTCTCCCCAGTTTCCGCCACCCCCTCCATCCCTACATCATCATCATCAACCGCAACCGCAACATATTAGATTTTCAGGAGGGTCGTTCCCGCCGTTGATGATGGCCTTCGGCGGTGGCGGTGGGGCGGCGGAGTCTTCAAGCGAAGATCTGAACATGTTTCAGTGTAATGAAGCGGGAGGGCATGGTTCAGTGCAGGCGGGAGCGTCATCGAAGAAGAGGTTTAGGACCAGGTTTAACCAGGAGCAGAAGGAGAGGATGATGGAGTTCGCAGAGAAGTTGGGATGGAGGATCCAGAAACATGACGAGCAAGAAGTACTACAGTTTTGTAATCAAGTGGGTGTAAAACGGCAGGTTTTCAAGGTTTGGATGCACAATAACAAGCAGGCCATGAAGAAGAAGCAGATGTAA 933 0.4909 MELRGLEKEIEMPLPTTSGYNRSNRDLSSSPTLASTAGETISDHQPPQSSDHYHHHPPSLPSNHLQQLQRNTRDPDPPSVTAITPIASRSNPRPAIRYRECLKNHAASMGRHVVDGCGEFTPSGEEGTAQSLRCAACDCHRNFHRKETDGEPQTNVLNFYAYPPSKSNNAQSRILSPQFPPPPPSLHHHHQPQPQHIRFSGGSFPPLMMAFGGGGGAAESSSEDLNMFQCNEAGGHGSVQAGASSKKRFRTRFNQEQKERMMEFAEKLGWRIQKHDEQEVLQFCNQVGVKRQVFKVWMHNNKQAMKKKQM 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00205 310 MobiDBLite consensus disorder prediction 167 196 - -
Accr9g00205 310 SUPERFAMILY Homeodomain-like 235 307 IPR009057 -
Accr9g00205 310 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 72 303 - -
Accr9g00205 310 FunFam Zinc-finger homeodomain protein 2 234 307 - -
Accr9g00205 310 MobiDBLite consensus disorder prediction 1 91 - -
Accr9g00205 310 MobiDBLite consensus disorder prediction 60 88 - -
Accr9g00205 310 NCBIfam homeobox domain, ZF-HD class 246 303 IPR006455 -
Accr9g00205 310 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 98 147 IPR006456 -
Accr9g00205 310 ProSiteProfiles 'Homeobox' domain profile. 244 308 IPR001356 GO:0003677
Accr9g00205 310 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 97 147 IPR006456 -
Accr9g00205 310 Pfam ZF-HD protein dimerisation region 96 148 IPR006456 -
Accr9g00205 310 Gene3D - 232 307 - -
Accr9g00205 310 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00205 Accr-Chr9 2212599 2213531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00205 87 310 ZF-HD Transcription Factor Family AT2G18350 53.448 2.23e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr9g00205 ZF-HD_dimer 1.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00205 - - qsu:111998832 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00205 9 2212599 2213531 Accr10g00032 10 387107 387853 CCT
Accr9g00205 9 2212599 2213531 Accr9g00205 9 2212599 2213531 ECH
Accr10g00032 10 387107 387853 Accr9g00205 9 2212599 2213531 ECH