Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00181 ATGGCCTTCTTCTCTTCCACTTCTTCTGAAAACAACCTTGCTACCGCAAAGACGGTGGTTTCGACGGCTGCCTCCGTCATAGCCACCGCTATGCTTGTTCGATCTGTGGCGCAAGACTTCTTGCCCAGGGACATTCAGGACTATTTCTTCGGCGGCATCCGCGGAATCTTCCATCGCTTCTCTTCTCAGTTCACCATGGTGATCGATGAGTTCGATGGTCTTGTTGGCAACAAAATCTATGACGCGGCACACACCTATTTGGGTAAAAAAGTCTCCCCCTCCGCTCGCAGAGTCAAGGTTAGCATGCCTGATGCTGAAAAGGACTTTGCGATCACCGTGGAACGCGACGAAGTCATCGTGGACGTGTTCGATGGGTTCAAATTCAATTGGGTCCTTATATGCAGGGAGGTTGAGTCCAAAAATTTTCACAATCCCAAAGACTTGAATTCGACGCTGCGATCGGAAGTCCGATCTTTGGAATTAAGTTTCCATAAGAACCACAAGGATTTGGTGCTAAAGTCATACCTTCCCTTCATTCTACAACAAGCGAATTTGATAAAGCAAGAAGCGAGGGCCCTCAGGATCTTTACTGTGGATTACGAGTGCATGTATGGGAATCTGAACGACGCGTGGATCCCAACAAATTTGGACCATCCATCTACATTTGAGACGTTGGCAATGGACCCTGACATAAAGAAATCTGTGATGGAAGATCTGGAGAGGTTTGTGAGAAGGAAGGAGTATTACAGGAAAGTAGGGAAGGCGTGGAAGAGAGGGTATCTGTTGTATGGCCCACCTGGAACTGGAAAATCGAGCTTGATCGCTGCAATGGCAAATTACTTGCATTTTGACATATACGATTTGGAGTTGACAGAAATACGATACAACTCAGAACTCCGGCGGTTACTAATTGCTTTGGCGAATAGGTCCATTCTTGTTGTTGAAGACATTGACTGCACCATTGAATTCCAAGATCGCATGGCGACATCAACAAGCACTTCAGGGTCTGAATCCACACAGCCACAGGTGACATTGTCGGGGTTACTGAACTTTGTTGACGGTTTGTGGTCAAGTTGTGGGGACGAGAGAATTATAGTGTTCACAACCAACCACAAAGAGAAGCTTGACCCGGCATTGCTCCGTCCAGGCCGTATGGACGTTCACATCCACATGTCCTATTGCTCTCCACATGTGTTTAGGCAGCTTGCTTTTAATTATCTTGAACTTGAGCAGCACTCTCTTTTCCCACAAATTGAAGAAGCCATTCTTCTTACCCACGTCACTCCTGCTGAGGTGGCTGAGCAGCTCTTGAAGATGAAGAATAGTGATCATGACTCTACTCTTCAAGACCTTCTGCAATTTCTTGCACAAAAAAAGATCGAAAATGAAGAGCTTGAGGCTAAAAAGAGGGAAACAGAACTGCTGTCTCATGACCAAGAAAAGCAGCCCGGTGATGATGCTCAAAAACTAGTGGATGAGGACCAAAAAGGAAGTAATTAA 1500 0.4607 MAFFSSTSSENNLATAKTVVSTAASVIATAMLVRSVAQDFLPRDIQDYFFGGIRGIFHRFSSQFTMVIDEFDGLVGNKIYDAAHTYLGKKVSPSARRVKVSMPDAEKDFAITVERDEVIVDVFDGFKFNWVLICREVESKNFHNPKDLNSTLRSEVRSLELSFHKNHKDLVLKSYLPFILQQANLIKQEARALRIFTVDYECMYGNLNDAWIPTNLDHPSTFETLAMDPDIKKSVMEDLERFVRRKEYYRKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLHFDIYDLELTEIRYNSELRRLLIALANRSILVVEDIDCTIEFQDRMATSTSTSGSESTQPQVTLSGLLNFVDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHIHMSYCSPHVFRQLAFNYLELEQHSLFPQIEEAILLTHVTPAEVAEQLLKMKNSDHDSTLQDLLQFLAQKKIENEELEAKKRETELLSHDQEKQPGDDAQKLVDEDQKGSN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00181 499 CDD RecA-like_BCS1 235 391 - -
Accr9g00181 499 Coils Coil 448 482 - -
Accr9g00181 499 Gene3D - 390 463 - -
Accr9g00181 499 SMART AAA_5 256 395 IPR003593 GO:0016887
Accr9g00181 499 PANTHER BCS1 AAA-TYPE ATPASE 21 463 - -
Accr9g00181 499 Pfam Domain associated at C-terminal with AAA 41 133 IPR025753 -
Accr9g00181 499 ProSitePatterns AAA-protein family signature. 363 381 IPR003960 GO:0005524|GO:0016887
Accr9g00181 499 Gene3D - 212 389 IPR027417 -
Accr9g00181 499 Pfam ATPase family associated with various cellular activities (AAA) 261 392 IPR003959 GO:0005524|GO:0016887
Accr9g00181 499 MobiDBLite consensus disorder prediction 468 499 - -
Accr9g00181 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 485 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00181 Accr-Chr9 2031088 2032758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00181 258 426 Calmodulin-binding Proteins AT3G56690 29.213 2.10e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00181 - K08900 qsu:112035142 652.514