Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00178 ATGTTTTCTGCCAGAGAGATGCCTTCTCCATCCTCAATTTTCTCAGCTTATGCCTCCATGGCTGCTTCTGTTATGCTGTTTCGTTCCATGGCCAACGACCTCATACCTTATCCGGTACGAAGTTATCTCCATAATACTTTTCGCTACCTCATCAAAACTTCCTCCCCTGTTCTCACCCTCGTCATCGAAGAATTCTGCGGAATTTCTCGCAACCAAGTGTTCGAGGCTGCAGAGGTTTACTTATCTTCCAAAGTCAGTCCCCAAAACAGGAGGCTCAAGATCAGCAAGAGTCCCAAAGACAAGTCTTTGAAGATTCGGCTGGAAAAGAATGAGGAGCTGGTGGATTCATATAACGGGATTGAGCTCAAATGGATACTCACCTATGCAGAGTCAGGCAACAATAATCAAATCTGTGATATAAACATTAAGCGATACTTTGAGTTGAGTTTTAACAAGAAGCATAGGGAGACGATTGTAAATTCTTATCTTCCCTTCGTCCTCCAGAAAGCCAAGTCCATTAAAGACGAGGAACGGATGTTGAAGATGTATACCTTAAGCAGCAACTCCTATGGTCATCCGGGGGTCAAGTGGGATTCTATCAATCTCGAACATCCATCCACCTTTGAGACTCTGGCTATGGAACCAGAGCTGAAGAATGCTGTGATGGAGGATTTGAATAGGTTCGTGAGGAGGAAGGACTTCTACAAGAAAGTCGGGAGGGCTTGGAAACGAGGGTACTTGCTGTATGGGCCTCCGGGTACTGGGAAATCAAGCTTGGTTGCAGCCATAGCTAATTACTTGAAGTTTGATATCTATGACCTTCAGCTTGAAAATATCACCAGAGATTCGGAACTCAGAAGGCTTCTTCTGAGCACTGCAAATAGGTCCATTCTAGTCATCGAAGACATTGATTGCAGCGTTGATCTGTCGGACCGCCGCCATCAGGTAGAAGGACGTAAGCACGCCGAGCCACCGCACAAGCTGACGTTGTCTGGGTTACTAAACTTCATAGATGGCCTTTGGTCAACCTGTGGAGATGAGAGGATAATAATATTCACCACTAACCACAAAGAAAGACTAGACCCAGCTCTGTTACGCCCTGGAAGAATGGATATGCACATTCACATGTCCTATTGCTCTTTCCATGGCTTCAAGCTTTTGGCCTCAAATTACTTGGGAACTTCCGGTCAGCAACACCAGGATCTGTTTACAGAAATAGAAGGTCTCATAGAAGACACAAACGTAACCCCTGCTCAAGTTGCAGAGGAGCTAATGAAGAGTGAAGATGCTAAAGACGCTCTTGAAGGCTTTGTGGGGCTGCTCAAGCGCAAGAAGATGGAAGGCGATGTGTGTGAGAATGATGAAACAGAGAAAGCTTTGATTCCAGAAGCCAAAAGGGCAAGAGTTAATAATGGCAAACAGGGCAAAACTAAGAGGAAGAATAGTTTGCGTACCCCACCAAGAAGGACAAGAGGAGGAAAAAGCTTGTAA 1491 0.4527 MFSAREMPSPSSIFSAYASMAASVMLFRSMANDLIPYPVRSYLHNTFRYLIKTSSPVLTLVIEEFCGISRNQVFEAAEVYLSSKVSPQNRRLKISKSPKDKSLKIRLEKNEELVDSYNGIELKWILTYAESGNNNQICDINIKRYFELSFNKKHRETIVNSYLPFVLQKAKSIKDEERMLKMYTLSSNSYGHPGVKWDSINLEHPSTFETLAMEPELKNAVMEDLNRFVRRKDFYKKVGRAWKRGYLLYGPPGTGKSSLVAAIANYLKFDIYDLQLENITRDSELRRLLLSTANRSILVIEDIDCSVDLSDRRHQVEGRKHAEPPHKLTLSGLLNFIDGLWSTCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSFHGFKLLASNYLGTSGQQHQDLFTEIEGLIEDTNVTPAQVAEELMKSEDAKDALEGFVGLLKRKKMEGDVCENDETEKALIPEAKRARVNNGKQGKTKRKNSLRTPPRRTRGGKSL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00178 496 MobiDBLite consensus disorder prediction 471 487 - -
Accr9g00178 496 FunFam AAA-ATPase ASD, mitochondrial 198 374 - -
Accr9g00178 496 MobiDBLite consensus disorder prediction 461 496 - -
Accr9g00178 496 ProSitePatterns AAA-protein family signature. 348 366 IPR003960 GO:0005524|GO:0016887
Accr9g00178 496 PANTHER BCS1 AAA-TYPE ATPASE 15 446 - -
Accr9g00178 496 Pfam ATPase family associated with various cellular activities (AAA) 247 377 IPR003959 GO:0005524|GO:0016887
Accr9g00178 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 428 IPR027417 -
Accr9g00178 496 Gene3D - 375 448 - -
Accr9g00178 496 Gene3D - 196 374 IPR027417 -
Accr9g00178 496 SMART AAA_5 242 380 IPR003593 GO:0016887
Accr9g00178 496 CDD RecA-like_BCS1 221 376 - -
Accr9g00178 496 Pfam Domain associated at C-terminal with AAA 35 126 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00178 Accr-Chr9 1989195 1991614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00178 202 376 Calmodulin-binding Proteins AT3G56690 28.261 3.33e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00178 - - gmx:100789621 664.84