Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00175 ATGGAGTATAGGGATTTCCACCTTCATCAGCATCAGCTCCAAGAAGAATATGCTGGCTACTATAAACCTTCCTTTACTTGTGAAGCATGGAACTCCAGCAACTTTTGTACGTTTACTGAAAGCAGTCAAAGCACTGGAATAAATCTAAGAGATAAAGGGGAAGAATATGATTTGGATCCAAGACGTCCATGTGGTGATGACATGCTTATAAAAGACGAGGTGTCTGATAATTATTTACCCAGCCACCTCTCTAGTTCTTGTGTGAACGATTCACTAGTCTCATCAATTAGTGAACATTCTCATGTAACTGGAAAAGAGATCTGGCCTGCAGGGATAGTCCTAGCCAATAAGACGACGTCGTACAACACCTTAGCTGCTGCATCTTCGTCAAGCTCCAATTTATCAGCCCTAGAGATGCCTCCTCCTTTATTACTGTCATGCTCTCTGGGCTTAAGTTCTCAGATGTTGCTGGGCGGCAATTCTTGTGGTGATGGCCTTCATCTTTCCTGCGATTCTTTTGGTCTTCATGACATGCAACAGCAAGAAAATAGTCCATCCAACAGCTCAAATAATAAAATTTCAGGATCTATAAGTGGGAGTGGAGTTGCACGGGCAAAAACGTCACGTAATCGGTCTCAAGAGAAGGAACATGAAGCAAGAGCAAAGAAGTCAAGGACTTCATGCCCTATCCTGAAGGTCAGAAAGGAAAAGCTGGGAGACAGGATTCAGACCCTTCAGAGTTTTGTGGCACCTTTTGGCAAGACCAATACTGCCTCCGTATTGAATGAAACTATAGGCTACATTCACTTCCTTCATGACCAAATTGAGACTTTGAGCATCCCTTACATGAAGAAGTCGTGGAAAACCAAAACCTTTGGAACGGTGCTGTTGCATTCTAGAGAGGAAACCAGCAGAGAATCGAAGCCAGACCTTGGAAGCAAAGGCCTCTGCCTCGTGCCCATTTCTTGCGCTTCGTATGTTTACAATTTGGACTAG 996 0.4378 MEYRDFHLHQHQLQEEYAGYYKPSFTCEAWNSSNFCTFTESSQSTGINLRDKGEEYDLDPRRPCGDDMLIKDEVSDNYLPSHLSSSCVNDSLVSSISEHSHVTGKEIWPAGIVLANKTTSYNTLAAASSSSSNLSALEMPPPLLLSCSLGLSSQMLLGGNSCGDGLHLSCDSFGLHDMQQQENSPSNSSNNKISGSISGSGVARAKTSRNRSQEKEHEARAKKSRTSCPILKVRKEKLGDRIQTLQSFVAPFGKTNTASVLNETIGYIHFLHDQIETLSIPYMKKSWKTKTFGTVLLHSREETSRESKPDLGSKGLCLVPISCASYVYNLD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00175 331 Gene3D - 218 291 IPR036638 GO:0046983
Accr9g00175 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 222 271 IPR011598 GO:0046983
Accr9g00175 331 MobiDBLite consensus disorder prediction 178 226 - -
Accr9g00175 331 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 118 325 - -
Accr9g00175 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 232 288 IPR036638 GO:0046983
Accr9g00175 331 CDD bHLH_AtbHLH_like 232 279 IPR045239 -
Accr9g00175 331 MobiDBLite consensus disorder prediction 208 226 - -
Accr9g00175 331 MobiDBLite consensus disorder prediction 178 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00175 Accr-Chr9 1980144 1982368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00175 169 326 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 46.061 9.24e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00175 - - pcin:129322669 276.944