Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00173 ATGTCAAACACGAAGCCGGAGCAATGGCAGTGGGAAAACGCCACTGCCGGCGCCATTGCAGGGTTTGCCACCGTCACTGCCACGCATCCCCTTGACGTTGTCCGAACTAGGTTCCAAGTTAATGATGGTCGAGTTCCCTTTGTTCCTAGTTACAAGAATACTGCTCATGCCATTTTCACCATTGCTCGCTCAGAGGGCTTAAGAGGTCTGTATGCAGGCTTGCTTCCTGCAGTACTTGGGTCAACTATTTCGTGGGGTCTATACTTCTATTTCTATGACAAAGCCAAACAAAGGTATGCTAGGAACAGGGAGGAGAAGCTGAGCCCTGGTTATCATCTTGCTTCAGCTGCCGAAGCAGGGACGTTGGTTTGCTTATGCACAAATCCTGTTTGGCTAATAAAAACAAGAATGCAGCTTCAAACTCCTCAGCATCAAGCACCACCGTATAATGGGATTTATGATGCATTTAAAACCATTACAAAAGAAGAAGGATTGAGGGCACTGTACAGGGGAATTGTTCCTAGTCTTTTTCTGCAGGTCTCTCATGGTGCTATGCAGTTCACGGTATATGAAGAGCTTCGGAAAGTGATAGTAGATTTGAAGAGTAAGGAAAGTAAGATGCATCATCAAATCCCCGATAAGCTGTTGAATTCTATGGATTACGCTGTTCTTGGAGCAACTTCAAAAGTTGCTGCCACTCTTATAAGCTATCCGTTTCAGGTCCTACGGGCTCGATTGCAGCAACGGCCTAGTGTTGATGGGATTCCAAGATACATGGATACTTGGCATGTCGTGAAGGAAACTGCGCGGTTTGAAGGTGTTCGAGGATTTTATAAAGGGATCACCGCAAACTTATTGAAAAACGTTCCTGCTTCATCTGTAACATTTATTGTCTACGAAAATGTGCTTAAATTGCTTAAATCAACAAGAAGGAATGACTAG 942 0.4459 MSNTKPEQWQWENATAGAIAGFATVTATHPLDVVRTRFQVNDGRVPFVPSYKNTAHAIFTIARSEGLRGLYAGLLPAVLGSTISWGLYFYFYDKAKQRYARNREEKLSPGYHLASAAEAGTLVCLCTNPVWLIKTRMQLQTPQHQAPPYNGIYDAFKTITKEEGLRALYRGIVPSLFLQVSHGAMQFTVYEELRKVIVDLKSKESKMHHQIPDKLLNSMDYAVLGATSKVAATLISYPFQVLRARLQQRPSVDGIPRYMDTWHVVKETARFEGVRGFYKGITANLLKNVPASSVTFIVYENVLKLLKSTRRND 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00173 313 Gene3D Mitochondrial carrier domain 10 306 IPR023395 -
Accr9g00173 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 216 305 IPR018108 -
Accr9g00173 313 FunFam folate transporter 1, chloroplastic isoform X1 1 103 - -
Accr9g00173 313 Pfam Mitochondrial carrier protein 219 307 IPR018108 -
Accr9g00173 313 Pfam Mitochondrial carrier protein 107 198 IPR018108 -
Accr9g00173 313 Pfam Mitochondrial carrier protein 9 102 IPR018108 -
Accr9g00173 313 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Accr9g00173 313 PRINTS Mitochondrial carrier protein signature 169 187 IPR002067 GO:0055085
Accr9g00173 313 PRINTS Mitochondrial carrier protein signature 225 247 IPR002067 GO:0055085
Accr9g00173 313 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Accr9g00173 313 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 310 IPR044712 GO:0006862|GO:0055085
Accr9g00173 313 SUPERFAMILY Mitochondrial carrier 10 301 IPR023395 -
Accr9g00173 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 98 IPR018108 -
Accr9g00173 313 FunFam Folate transporter 1, chloroplastic 104 311 - -
Accr9g00173 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 196 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00173 Accr-Chr9 1923213 1929090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00173 26 306 Chloroplast and Mitochondria Gene Families AT2G47490 36.491 8.02e-48 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00173 K15115 - gmx:100809599 512.686