Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00172 ATGTCAAACACGAAGCCGGAGCAATGGCAGTGGGAAAACGCCACTGCCGGCGCCATTGCAGGGTTTGCCACCGTCACTGCCACGCATCCCCTTGACGTTGTCCGAACTAGGTTCCAAGTTAATGATGGTCGAGTTCCCTTTGTTCCTAGTTACAAGAATACTGCTCATGCCATTTTCACCATTGCTCGCTCAGAGGGCTTAAGAGGTCTGTATGCAGGCTTGCTTCCTGCAGTACTTGGGTCAACTATTTCGTGGGGTCTATACTTCTATTTCTATGACAAAGCCAAACAAAGGTATGCTAGGAACAGGGAGGAGAAGCTGAGCCCTGGTTATCATCTTGCTTCAGCTGCCGAAGCAGGGACGTTGGTTTGCTTATGCACAAATCCTGTTTGGCTAATAAAAACAAGAATGCAGCTTCAAACTCCTCAGCATCAAGCACCACCGTATAATGGGATTTATGATGCATTTAAAACCATTACAAAAGAAGAAGGATTGAGGGCACTGTACAGGGGAATTGTTCCTAGTCTTTTTCTGGTCTCTCATGGTGCTATGCAGTTCACGGTATATGAAGAGCTTCGGAAAGTGATAGTAGATTTGAAGAGTAAGGAAAGTAAGATGCATCATCAAATCCCCGATAAGCTGTTGAATTCTATGGATTACGCTGTTCTTGGAGCAACTTCAAAAGTTGCTGCCACTCTTATAAGCTATCCGTTTCAGGTCCTACGGGCTCGATTGCAGCAACGGCCTAGTGTTGATGGGATTCCAAGATACATGGATACTTGGCATGTCGTGAAGGAAACTGCGCGGTTTGAAGGTGTTCGAGGATTTTATAAAGGGATCACCGCAAACTTATTGAAAAACGTTCCTGCTTCATCTGTAACATTTATTGTCTACGAAAATGTGCTTAAATTGCTTAAATCAACAAGAAGGAATGACTAG 939 0.4452 MSNTKPEQWQWENATAGAIAGFATVTATHPLDVVRTRFQVNDGRVPFVPSYKNTAHAIFTIARSEGLRGLYAGLLPAVLGSTISWGLYFYFYDKAKQRYARNREEKLSPGYHLASAAEAGTLVCLCTNPVWLIKTRMQLQTPQHQAPPYNGIYDAFKTITKEEGLRALYRGIVPSLFLVSHGAMQFTVYEELRKVIVDLKSKESKMHHQIPDKLLNSMDYAVLGATSKVAATLISYPFQVLRARLQQRPSVDGIPRYMDTWHVVKETARFEGVRGFYKGITANLLKNVPASSVTFIVYENVLKLLKSTRRND 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00172 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 195 IPR018108 -
Accr9g00172 312 FunFam folate transporter 1, chloroplastic isoform X1 1 103 - -
Accr9g00172 312 Pfam Mitochondrial carrier protein 9 102 IPR018108 -
Accr9g00172 312 Pfam Mitochondrial carrier protein 107 197 IPR018108 -
Accr9g00172 312 Pfam Mitochondrial carrier protein 218 306 IPR018108 -
Accr9g00172 312 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Accr9g00172 312 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Accr9g00172 312 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
Accr9g00172 312 Gene3D Mitochondrial carrier domain 103 310 IPR023395 -
Accr9g00172 312 Gene3D Mitochondrial carrier domain 1 102 IPR023395 -
Accr9g00172 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 309 IPR044712 GO:0006862|GO:0055085
Accr9g00172 312 FunFam Folate transporter 1, chloroplastic 104 310 - -
Accr9g00172 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 98 IPR018108 -
Accr9g00172 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 304 IPR018108 -
Accr9g00172 312 SUPERFAMILY Mitochondrial carrier 10 300 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00172 Accr-Chr9 1923213 1929090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00172 26 312 Chloroplast and Mitochondria Gene Families AT1G25380 33.333 2.92e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00172 K15115 - gmx:100809599 517.309