Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00132 ATGGAAGCGATGGAGTCATGTGTCCCACCGGGCTTTCGGTTCCACCCAACAGATGAAGAGCTCGTTGGTTACTATCTCAGGAAGAAAGTCGCTTCTCAGAAGATAGATCTTGACGTCATCAGAGAGATCGATCTATATCGCATTGAACCATGGGATCTCCAAGAAAGATGCAGGATCGGGTATGAGGAACAAAACGAATGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCGACGGGGACGAGGACCAACAGAGCCACCGTGGCTGGGTTCTGGAAGGCGACAGGAAGAGACAAGGCAGTGTACGACAAGACAAAGCTCATAGGAATGAGGAAGACCCTTGTTTTCTACAAAGGAAGAGCTCCTAATGGCCAGAAAACTGACTGGATCATGCATGAGTATAGGCTTGAATCTGATGAAAATGCACCCCCTCAGGCAAAAGGATGGGTTGTATGCAGAGCCTTCAAGAAAAAAAGCAATGGCCAGACGAAGACAATAGAAGGATGGGATTCAGGTTACTTTTATGAGGAGACAAGTGGAATGGACTACGTAGCAAGGCAGGCTCATCATCATCAGAGTTTCATAGCTCCAAGTTTTTTGTGTAAGAAGGAGATAGAAGCAGATCATAATAACTTGAACTTCATGCACTCATCATCAGATCAGTTCGTACAGCTTCCTCAGCTAGAAAGTCCATCTCTGCCATTAATAAAGGGGACAAGCTCAGCACTAGCGTCTTTAATATCACACAATAATAATAACAAGAACGTATTAGGAGAAGATGACCAAAGCAACAGGCTGGTCAACAACAACAACACCACCACCAAAAGGGTGACTACTGATTGGAGGGCTCTTGACAAATTTGTGGCATCTCAATTGAGTCAAGAAGAAGAGAGGCATGATGAGAGTAGTGATAATCATGGAGTGTCAGGCTTTGAAACGCACGAGGCATTGCTGCTATTGCAGAGTGGTAGCGATGAAGCAGGCAACAAGTTCATGAGCCCATTTTTAAATGGAAGCTCTGACTGTGACATTGGGATATGCGTGTTTGATAAATGA 1056 0.446 MEAMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQAKGWVVCRAFKKKSNGQTKTIEGWDSGYFYEETSGMDYVARQAHHHQSFIAPSFLCKKEIEADHNNLNFMHSSSDQFVQLPQLESPSLPLIKGTSSALASLISHNNNNKNVLGEDDQSNRLVNNNNTTTKRVTTDWRALDKFVASQLSQEEERHDESSDNHGVSGFETHEALLLLQSGSDEAGNKFMSPFLNGSSDCDIGICVFDK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00132 351 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Accr9g00132 351 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Accr9g00132 351 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Accr9g00132 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 268 - -
Accr9g00132 351 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Accr9g00132 351 FunFam NAC domain-containing protein 17 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00132 Accr-Chr9 1496514 1498759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00132 1 350 NAC Transcription Factor Family AT2G18060 59.677 2.98e-157 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr9g00132 NAM 2.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00132 - - aprc:113869508 504.597