Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr9g00128 | ATGCGAACTAGAAACGCTGGTTCTTCCAAGACACCGCCGGCTAAGAAGACACCGCCGACGAGGAAATCGACATCTAAAAGCCCGGCGAACGCACAATCCTCCCAGACCAAGCGCACCTCTACGATCAAAACTAGGCAGGCAAAGAAGAACGAGGCCTCGCCCCTACAAAATACAAGCTTCAATGAGGAACCGGAGCAATCATCCGAGGAGGCAAAGGCAGCAGCTGATGCCTCTCCAGTGACGCCAGAGACAAAAGTTGTTACAGCTGCAAAGTCAACACCAAAGAGGACGCCTAAGAGAGCTGTGGGAAGACCGAGGAATTCAACTAAAGCTGTTACTGCCCGGGGACAAGAAGAACAAGTGGAGACAATAGCTGATGAAACACCGAAAGCGGATAATATTGAAGAAGCTAAGAAATTGGAGGAGCCTCAAAATGTTGAGGTAGTCAAAGCAGATAAAATTGAGAGTAAAGAAGCGGGGGAACAAAGGGTTGAGTTTGTTAGACAATCTGCAGAGAATGAACTACATCCCAAGGAAAGGGATGAGCGTAATGCTGATAGTGCCAGTGAATTAGCAGAAAAGAAAAGAGACATAGTTGAAGCTGCCTCCCAAGGTGTCCCTATTTTGTTGAATCAAGAAGAACCTTGCATGGCGGAGCTCTCTAAATCTTTGGAGAATGAAGAACCCACTGGTGCAAAAGAAGGAGAGCAAACAAATGAAGAGGAATGGGAAAAAGAATCAGAAAAATCAATGAAAGAACAGACAACTAATATTGGACATAAAGAGCAATTTAATGCTGATCCTGTCAGTATGGAAATGAAAGACCAAAGAGAGCAAGTGAAGAAGGTGGATGGAGAAAAAGAATCAGATAAATCAATGGAAAAGGAGGGAGAAAAAGCATTAGAACAATCCATGCAAGAAGAGACAAGTAATATTATACATAACCAGGAATCTAATGCTGATTCTGTTGAGAAGGAAACGACAAACCAACTTCTGCAAGATGATGTTAAACCTGAAAAGGAGAATCCAAGTGGTGATCAAGCCGCTGAAGGCTGTGGTGAAATGTTGGATAGTGAAAAACAAGGGGGGGAGGAGTTTGTTGAGGCTGATCCAGAGGAGCCTCTTGAAGAAGCTGAGACATTTGATGAGGAACACAAGGAATTGTCAACTATGGCAAAGGAGCGCAAGATTAAGAAAGAGAATGAAATATTTGTGGGTGGGCTTGATCGTGATGCTACAGAGGAGGATCTTAAAAAGGTTTTTGAGAAGATTGGGGAGATAGTTGACGTTAGGTTGCATAAAAATTCTTCAACAAACAAAAACAAGGGCTATGCATTCGTAAAATTTTCTTGTAAGGAACATGCAAAGAAAGCTTTGTCAGAAATGAAAAACCCTGTTATACGTGGTAAGCGATGTGGCACCGCACCCAGTGAGGATAATGATACATTATTCTTAGGAAATATATGCAATACATGGACAAAAGAAGCTATCAAACAGAAGTTGAAGGATTATGGTGTTGAGGATGTTGAAAACATTACACTTGTCCCAGATGTTCGCCATGAAGGATTAAGCCGGGGTTTTGCGTTTCTTGAGTTCTCCTGTCACCACAATGCCATGCTTGCCTATAAGAGGCTTCAAAAGCCTGATGTAATCTTTGGACATGCTGAGCGAACAGTCAAAGTAGCCTTTGCTGAACCTGTACGAGAGCTGGATCCAGAGATTATGGCACAGGTGAAGTCTGTTTTTGTTGATGGTCTCCCTCCACATTGGGATGAAGGCTGCATTAGGGAGCACTTCAAAGGTTATGGTGAAATTGTACGAATTGTACTTGCCCGGAATATGACTACTGCTAATAGGAAAGATTTTGGATTTGTTGATTTCTCTACACATGAAGCCGCTCTAGCTTGTGTTGATGGTGTAAATAGTTCAGACTTTGTTGATGGAACACAAAAGACTAAGGTGAGAGCTAGACTTTCAAATCCTTTGCCTAAAACACAGGCTGTTAAGGGAGGCATGTGTGGTGGGTTCCGGATTGGTCATGCTCGTGGTGGAGCTTTTCCAAGATCTGCTGTAATAGGAAGGGGTTTTACTCGTGGAGGACATGCTGCCAACTGGGGAAATTTTAATAGGGATCGGAATTTTAATCTTGGAGGACATGGTCAAATTGGAAGAATGGGTTTCAGGAATGATTTTAATCTTAATAATGCTTATCCAGATTTTCATCAGAGGCAATTCGGGGAAAGGATGATTCCTTTGAGGGGTGGACATTATGCAGATACACAAGGTGCTGCAGTTGCTGGACCATCTAGGCCTTATCTTGATAGAGCATGGTATGGTACCCCTGAGAGAGGCCCTGGTGAACGGATTCCCCCAAGGATGCCATGGTATGGTACCGCTGAGAGAGGCCCTGGTGAACCTATTCCCCCGAGGATGCCATTCTCCCCTGAAGGACAATTTGATAGGCCTTTTATGGGAAGGCATATTGATGATCCATATCTTTATGAAGACAGTGTGCATGGGATGAAACGACCATTTTATATGACTGACCCGGATCCTAATTACATGGGTCCTGCTAGAGTTCGTCCTCGACTGGATTATACAGATCCTGCTGTATTTCCTGGCAGTCGTTACAATGATTCTATTGCAGCTGGCAGGGAACAGTACTCACATGATTATCATGGTGCTGATTATGGTGGAGGTCCATATTCATCTTTTTATGGGGGTGACAACTCATATGGGCGAAGATACTACTACTAG | 2757 | 0.436 | MRTRNAGSSKTPPAKKTPPTRKSTSKSPANAQSSQTKRTSTIKTRQAKKNEASPLQNTSFNEEPEQSSEEAKAAADASPVTPETKVVTAAKSTPKRTPKRAVGRPRNSTKAVTARGQEEQVETIADETPKADNIEEAKKLEEPQNVEVVKADKIESKEAGEQRVEFVRQSAENELHPKERDERNADSASELAEKKRDIVEAASQGVPILLNQEEPCMAELSKSLENEEPTGAKEGEQTNEEEWEKESEKSMKEQTTNIGHKEQFNADPVSMEMKDQREQVKKVDGEKESDKSMEKEGEKALEQSMQEETSNIIHNQESNADSVEKETTNQLLQDDVKPEKENPSGDQAAEGCGEMLDSEKQGGEEFVEADPEEPLEEAETFDEEHKELSTMAKERKIKKENEIFVGGLDRDATEEDLKKVFEKIGEIVDVRLHKNSSTNKNKGYAFVKFSCKEHAKKALSEMKNPVIRGKRCGTAPSEDNDTLFLGNICNTWTKEAIKQKLKDYGVEDVENITLVPDVRHEGLSRGFAFLEFSCHHNAMLAYKRLQKPDVIFGHAERTVKVAFAEPVRELDPEIMAQVKSVFVDGLPPHWDEGCIREHFKGYGEIVRIVLARNMTTANRKDFGFVDFSTHEAALACVDGVNSSDFVDGTQKTKVRARLSNPLPKTQAVKGGMCGGFRIGHARGGAFPRSAVIGRGFTRGGHAANWGNFNRDRNFNLGGHGQIGRMGFRNDFNLNNAYPDFHQRQFGERMIPLRGGHYADTQGAAVAGPSRPYLDRAWYGTPERGPGERIPPRMPWYGTAERGPGEPIPPRMPFSPEGQFDRPFMGRHIDDPYLYEDSVHGMKRPFYMTDPDPNYMGPARVRPRLDYTDPAVFPGSRYNDSIAAGREQYSHDYHGADYGGGPYSSFYGGDNSYGRRYYY | 918 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr9g00128 | 918 | SUPERFAMILY | RNA-binding domain, RBD | 479 | 647 | IPR035979 | GO:0003676 | |
Accr9g00128 | 918 | Gene3D | - | 372 | 479 | IPR012677 | - | |
Accr9g00128 | 918 | CDD | RRM_SF | 581 | 645 | - | - | |
Accr9g00128 | 918 | MobiDBLite | consensus disorder prediction | 150 | 198 | - | - | |
Accr9g00128 | 918 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
Accr9g00128 | 918 | CDD | RRM_SF | 403 | 472 | - | - | |
Accr9g00128 | 918 | FunFam | Heterogeneous nuclear ribonucleoprotein Q | 566 | 719 | - | - | |
Accr9g00128 | 918 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 579 | 661 | IPR000504 | GO:0003723 | |
Accr9g00128 | 918 | MobiDBLite | consensus disorder prediction | 328 | 344 | - | - | |
Accr9g00128 | 918 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 403 | 471 | IPR000504 | GO:0003723 | |
Accr9g00128 | 918 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 581 | 644 | IPR000504 | GO:0003723 | |
Accr9g00128 | 918 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 483 | 550 | IPR000504 | GO:0003723 | |
Accr9g00128 | 918 | FunFam | Heterogeneous nuclear ribonucleoprotein Q | 481 | 565 | - | - | |
Accr9g00128 | 918 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 401 | 479 | IPR000504 | GO:0003723 | |
Accr9g00128 | 918 | Gene3D | - | 480 | 565 | IPR012677 | - | |
Accr9g00128 | 918 | MobiDBLite | consensus disorder prediction | 218 | 383 | - | - | |
Accr9g00128 | 918 | SUPERFAMILY | RNA-binding domain, RBD | 397 | 473 | IPR035979 | GO:0003676 | |
Accr9g00128 | 918 | MobiDBLite | consensus disorder prediction | 1 | 132 | - | - | |
Accr9g00128 | 918 | Gene3D | - | 571 | 676 | IPR012677 | - | |
Accr9g00128 | 918 | MobiDBLite | consensus disorder prediction | 304 | 327 | - | - | |
Accr9g00128 | 918 | MobiDBLite | consensus disorder prediction | 226 | 256 | - | - | |
Accr9g00128 | 918 | SMART | rrm1_1 | 580 | 655 | IPR000504 | GO:0003723 | |
Accr9g00128 | 918 | SMART | rrm1_1 | 482 | 562 | IPR000504 | GO:0003723 | |
Accr9g00128 | 918 | SMART | rrm1_1 | 402 | 475 | IPR000504 | GO:0003723 | |
Accr9g00128 | 918 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN | 234 | 918 | - | - | |
Accr9g00128 | 918 | MobiDBLite | consensus disorder prediction | 267 | 303 | - | - | |
Accr9g00128 | 918 | CDD | RRM_SF | 483 | 561 | - | - | |
Accr9g00128 | 918 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 481 | 566 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr9g00128 | Accr-Chr9 | 1459126 | 1463840 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr9g00128 | 403 | 647 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 24.506 | 3.79e-14 | 74.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr9g00128 | - | - | pcin:129322150 | 1369.37 |