Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00115 ATGGAAGCCCAACAGCAGCAGCAACAGGAGGATGGTGGAGGAAATAGAGGAGGGTATATGTGCAGGCAAAGCAGTACAAGGTGGACGCCCACAAGTGACCAGATAAGGATACTGAAGGACCTTTATTACAATAATGGAGTTAGGTCCCCAAATGCAGAGCAGATTCAGAGAATCTCCGCTAGGCTGAGGCAGTACGGCAAGATTGAAGGCAAGAACGTCTTTTACTGGTTCCAGAACCACAAGGCCCGTGAACGCCAGAAAAAACGCTTCACCACCACCACTACTACTTCCTCCTCTGATCTTCTTCCCCCCTCCACCCCCATGCATTTCCACAGTAGACCTCCTCCTCCTCCCACTCCTACTACCAACAATATCCCTCCACCTCCTAATAATTGGAAGCCTGATCACGAACCCAATATTCTTCACCCCAAGTATTCCAACATACCACCATCTCACGGGGTTTCTTCCGCTTCTGGGATGGTTGCTCTGGGCCAGATGGGGAACTATGGCTATGGATCTGTCACTATGGAGAAGTGTTTTAGGGACTGCTCAATATCAGCAGGAGGAAGCAGTGGCACCATAAGCCACCAGAATTTGGGATGGGTAGGTATGGATCCGTACGCAAACTACAGTAACTTGTTGGACAAAATAAGGCCTGGAGATCAAGAAACCCTGAAAGATGAACAAGAGGGGGAAGATGATGGAGCCCCTGAGATTGAAACCCTCCCTCTGTTTCCCATGCACGGCGAGGACATCCACGGCTACTGCAACCTCAGGTCTGATTCCTCTTCTTACTATGCCGGTGGCTGGTATCATCACGCCGCCGCCGATGAATATGCCTTCAAGAACGTCGTCAATGGCTCTCATCACCGTACTTCCCTCGAGCTCACCCTCAACTCCTACACCCGCAGATCTCCAGATTCAACTTGA 930 0.5054 MEAQQQQQQEDGGGNRGGYMCRQSSTRWTPTSDQIRILKDLYYNNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTTTTTTSSSDLLPPSTPMHFHSRPPPPPTPTTNNIPPPPNNWKPDHEPNILHPKYSNIPPSHGVSSASGMVALGQMGNYGYGSVTMEKCFRDCSISAGGSSGTISHQNLGWVGMDPYANYSNLLDKIRPGDQETLKDEQEGEDDGAPEIETLPLFPMHGEDIHGYCNLRSDSSSYYAGGWYHHAAADEYAFKNVVNGSHHRTSLELTLNSYTRRSPDST 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00115 309 CDD homeodomain 26 88 IPR001356 GO:0003677
Accr9g00115 309 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 300 IPR044555 GO:0003700|GO:0099402
Accr9g00115 309 Pfam Homeodomain 25 86 IPR001356 GO:0003677
Accr9g00115 309 ProSiteProfiles 'Homeobox' domain profile. 21 87 IPR001356 GO:0003677
Accr9g00115 309 MobiDBLite consensus disorder prediction 91 105 - -
Accr9g00115 309 SMART HOX_1 23 91 IPR001356 GO:0003677
Accr9g00115 309 MobiDBLite consensus disorder prediction 1 29 - -
Accr9g00115 309 MobiDBLite consensus disorder prediction 108 134 - -
Accr9g00115 309 MobiDBLite consensus disorder prediction 85 140 - -
Accr9g00115 309 Gene3D - 25 91 - -
Accr9g00115 309 SUPERFAMILY Homeodomain-like 14 88 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00115 Accr-Chr9 1337232 1338639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00115 19 251 Wox Gene Family AT2G17950 43.373 1.47e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Accr9g00115 Homeodomain 1.7e-17 CL0123