Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00107 ATGCTCCCTCTCTCTCGCCCTGCCCCTCTTGCCGCCATTGGGTTCTCTGGCAATCCTGTTTCCTCTTCGCCCCCAGCGTCGCCTAATCGTCTTCCAATCCGGCCGATCGTCGCCTCCGCTACCGCGACAGAATCTTGCTCCACTTGGACTGAGCAGCCGAAATCGAGGTCCTCCTATCTCAGTTCACTTACCATGTCTTCGTTGACGTCGCTGTACGAGATTCTAGGGATTCCGGCGGGCGCGTCCCATCAAGAAATTAAAGCGGCCTACCGACGATTGGCGAGGGTATGCCATCCGGATGTGGCGGCGGTGGGTCGGAAGGATTCGTCGGCCGACGACTTTATGAAGATTCACGCCGCGTACTCCACTCTGTCGGACCCCCAAAAGCGCGCCACCTACGACAGGAGCCTCTTCGTCCGTCGACAGAGGCCTTTGTCCACGGCGTCTTCGTATTCCGGTTACAGTGGCCGGAACTGGGAAACTGACCAGTGTTGGTAG 498 0.5863 MLPLSRPAPLAAIGFSGNPVSSSPPASPNRLPIRPIVASATATESCSTWTEQPKSRSSYLSSLTMSSLTSLYEILGIPAGASHQEIKAAYRRLARVCHPDVAAVGRKDSSADDFMKIHAAYSTLSDPQKRATYDRSLFVRRQRPLSTASSYSGYSGRNWETDQCW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00107 165 ProSiteProfiles dnaJ domain profile. 70 137 IPR001623 -
Accr9g00107 165 SMART dnaj_3 69 129 IPR001623 -
Accr9g00107 165 CDD DnaJ 72 126 IPR001623 -
Accr9g00107 165 PRINTS DnaJ domain signature 72 90 IPR001623 -
Accr9g00107 165 PRINTS DnaJ domain signature 109 129 IPR001623 -
Accr9g00107 165 PRINTS DnaJ domain signature 90 105 IPR001623 -
Accr9g00107 165 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Accr9g00107 165 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 38 161 - -
Accr9g00107 165 SUPERFAMILY Chaperone J-domain 64 140 IPR036869 -
Accr9g00107 165 Gene3D DnaJ domain 55 157 IPR036869 -
Accr9g00107 165 Pfam DnaJ domain 71 134 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00107 Accr-Chr9 1233816 1234313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00107 60 134 C2H2 Transcription Factor Family AT1G74250 41.026 1.56e-09 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00107 9 1233816 1234313 Accr9g00107 9 1233816 1234313 ECH